RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ZNF254O75437 659 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 ZNF250P15622 560 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 VHLP40337 213 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 OPRL1P41146 370 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 KLF3P57682 345 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 CXCR4P61073 352 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 ISL1P61371 349 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 SNRPD2P62316 118 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 MALLQ13021 153 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 SWI5Q1ZZU3 235 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 MST1LQ2TV78 715 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 KLHL22Q53GT1 634 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 SPATA46Q5T0L3 261 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 C6orf52Q5T4I8 152 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 LRRN1Q6UXK5 716 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 MARS2Q96GW9 593 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 AMELYQ99218 206 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 TBX5Q99593 518 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 SYT3Q9BQG1 590 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 MRPL37Q9BZE1 423 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 OR2J1Q9GZK6 312 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 BEX4Q9NWD9 120 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 SLCO1C1Q9NYB5 712 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 COPS3Q9UNS2 423 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 KLHDC2Q9Y2U9 406 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 N6AMT1Q9Y5N5 214 aa12.56□□□□□ -0.4
NCKIPSD-207ENST00000453349 RAI1Q7Z5J4 1906 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 TMEM129A0AVI4 362 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 DAPL1A0PJW8 107 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 H3BSA7 217 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 APOL3O95236 402 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 DBTP11182 482 aaKnown RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 OTX1P32242 354 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 CX3CR1P49238 355 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 EGR3Q06889 387 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 DEFB113Q30KQ7 82 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 MBNL2Q5VZF2 373 aaKnown RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 C11orf71Q6IPW1 123 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 IZUMO2Q6UXV1 221 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 COLCA1Q6ZS62 124 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 RFPL4BQ6ZWI9 263 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 THAP5Q7Z6K1 395 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 LRP11Q86VZ4 500 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 ZNF679Q8IYX0 411 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 OR10H4Q8NGA5 316 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 CNIH3Q8TBE1 160 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 KLF14Q8TD94 323 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 APH1BQ8WW43 257 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 MBD6Q96DN6 1003 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 OR8B4Q96RC9 309 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 DOK1Q99704 481 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 CACNG6Q9BXT2 260 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 AMBNQ9NP70 447 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 PTTG3PQ9NZH4 202 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 IKZF2Q9UKS7 526 aa12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 EXOGQ9Y2C4 368 aaKnown RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
NCKIPSD-207ENST00000453349 PKDREJQ9NTG1 2253 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 A0A1W2PPW3 197 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 A0A1W2PQL4 384 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 OVOL3O00110 214 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 PSMD9O00233 223 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 WBP4O75554 376 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 FADS2O95864 444 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 CLPTM1O96005 669 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 ANXA2P07355 339 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 GNAO1P09471 354 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 CDKN1AP38936 164 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 RIDAP52758 137 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 ACTC1P68032 377 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 ACTA1P68133 377 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 ROM1Q03395 351 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 RAB40BQ12829 278 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 CDK5R2Q13319 367 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 MSMPQ1L6U9 139 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 ZNF322Q6U7Q0 402 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 USP51Q70EK9 711 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 SNX33Q8WV41 574 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 IGFBPL1Q8WX77 278 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 HAVCR1Q96D42 359 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 MRPL48Q96GC5 212 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 RASSF4Q9H2L5 321 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 MS4A5Q9H3V2 200 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 DYNLRB1Q9NP97 96 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 BRD7Q9NPI1 651 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 MRPS18AQ9NVS2 196 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 TAAR3PQ9P1P4 343 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
NCKIPSD-207ENST00000453349 IGLV3-9A0A075B6K5 115 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 TBX1O43435 398 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 MT-ND5P03915 603 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 KRT8P05787 483 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 RAC2P15153 192 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms