RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 TAAR3PQ9P1P4 343 aa17.07■□□□□ 0.32
COL9A3-202ENST00000452372 GPR160Q9UJ42 338 aa17.07■□□□□ 0.32
COL9A3-202ENST00000452372 STARD10Q9Y365 291 aa17.07■□□□□ 0.32
COL9A3-202ENST00000452372 EI24O14681 340 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 TLX2O43763 284 aaPredicted RBP17.06■□□□□ 0.32
COL9A3-202ENST00000452372 ERCC1P07992 297 aaPredicted RBP17.06■□□□□ 0.32
COL9A3-202ENST00000452372 MPV17P39210 176 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 ALDH3A2P51648 485 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 MAD2L1BPQ15013 274 aaPredicted RBP17.06■□□□□ 0.32
COL9A3-202ENST00000452372 NKPD1Q17RQ9 610 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 SHFQ7M4L6 423 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 CBR4Q8N4T8 237 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 TCEANCQ8N8B7 351 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 ST7LQ8TDW4 575 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 APOBEC3DQ96AK3 386 aaPredicted RBP17.06■□□□□ 0.32
COL9A3-202ENST00000452372 C9orf16Q9BUW7 83 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 RIBC2Q9H4K1 309 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 ORC6Q9Y5N6 252 aa17.06■□□□□ 0.32
COL9A3-202ENST00000452372 F5H5K5 113 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 LY6HO94772 140 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 BAG2O95816 211 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 ACSM4P0C7M7 580 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 DSCR9P59020 149 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 RPS7P62081 194 aaKnown RBP17.05■□□□□ 0.32
COL9A3-202ENST00000452372 APOFQ13790 326 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 COLCA1Q6ZS62 124 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 MAPK1IP1LQ8NDC0 245 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 OR6N2Q8NGY6 317 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 TMEM163Q8TC26 289 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 SPTSSAQ969W0 71 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 SLAMF6Q96DU3 332 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 TEAD3Q99594 435 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 POFUT1Q9H488 388 aa17.05■□□□□ 0.32
COL9A3-202ENST00000452372 YLPM1P49750 1951 aaKnown RBP17.05■□□□□ 0.32
COL9A3-202ENST00000452372 ANKRD65E5RJM6 399 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 NAT2P11245 290 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 OTX1P32242 354 aaPredicted RBP17.04■□□□□ 0.32
COL9A3-202ENST00000452372 RAD23AP54725 363 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 TPTEP56180 551 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 EIF2B1Q14232 305 aaKnown RBP17.04■□□□□ 0.32
COL9A3-202ENST00000452372 CLEC2AQ6UVW9 174 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 ZNF525Q8N782 197 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 OR5L1Q8NGL2 311 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 SNX33Q8WV41 574 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 MDFIQ99750 246 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 RHNO1Q9BSD3 238 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 C1QTNF5Q9BXJ0 243 aa17.04■□□□□ 0.32
COL9A3-202ENST00000452372 C17orf100A8MU93 164 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 RNF223E7ERA6 249 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 M0R129 80 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 SELENOFO60613 162 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 PSG7Q13046 419 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 ALKBH6Q3KRA9 238 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 TMEM255AQ5JRV8 349 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 AADACL4Q5VUY2 407 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 NXNL2Q5VZ03 156 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 ZBTB49Q6ZSB9 765 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 RHOUQ7L0Q8 258 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 NAA40Q86UY6 237 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 ZNF454Q8N9F8 522 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 OTOSQ8NHW6 89 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 CMBLQ96DG6 245 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 IL4I1Q96RQ9 567 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 KCNJ15Q99712 375 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 SLC29A1Q99808 456 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 ABHD6Q9BV23 337 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 TPK1Q9H3S4 243 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 MYOZ1Q9NP98 299 aaPredicted RBP17.03■□□□□ 0.32
COL9A3-202ENST00000452372 CENPMQ9NSP4 180 aa17.03■□□□□ 0.32
COL9A3-202ENST00000452372 H2AFY2Q9P0M6 372 aaPredicted RBP17.03■□□□□ 0.32
COL9A3-202ENST00000452372 CCDC182A6NF36 153 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 ZNF878C9JN71 531 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 M0R135 149 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 MT-ND5P03915 603 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 CSF3P09919 207 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 RAC2P15153 192 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 LIPAP38571 399 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 SLC15A1P46059 708 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 MMP15P51511 669 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 TAF13Q15543 124 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 LCN1P1Q5VSP4 162 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 MEPCEQ7L2J0 689 aaKnown RBP17.02■□□□□ 0.32
COL9A3-202ENST00000452372 BCDIN3DQ7Z5W3 292 aaKnown RBP17.02■□□□□ 0.32
COL9A3-202ENST00000452372 RNF133Q8WVZ7 376 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 FAM168AQ92567 244 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 EME1Q96AY2 570 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 HAVCR1Q96D42 359 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 ZNF799Q96GE5 643 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 HRASLS5Q96KN8 279 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 COPS4Q9BT78 406 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 REG4Q9BYZ8 158 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 CYSLTR2Q9NS75 346 aa17.02■□□□□ 0.32
COL9A3-202ENST00000452372 CGGBP1Q9UFW8 167 aaPredicted RBP17.02■□□□□ 0.32
COL9A3-202ENST00000452372 E9PQ18 207 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 LCATP04180 440 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 DAOP14920 347 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 KITLGP21583 273 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 PDLIM4P50479 330 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 CDC42P60953 191 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 GRB2P62993 217 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms