RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 TIGD4Q8IY51 512 aa13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 DNAJC9Q8WXX5 260 aa13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 APOBEC3DQ96AK3 386 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 COG8Q96MW5 612 aa13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 PITX2Q99697 317 aa13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 ATF6BQ99941 703 aa13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 CYSLTR2Q9NS75 346 aa13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 ZNF275Q9NSD4 429 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 CGGBP1Q9UFW8 167 aaPredicted RBP13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 POLR1DQ9Y2S0 133 aa13.68□□□□□ -0.22
SCAMP4-205ENST00000452128 LRP5LA4QPB2 252 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 H3BN98 237 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 WNT9BO14905 357 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 CRLF1O75462 422 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 HLA-DQA2P01906 255 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 HMGN1P05114 100 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 ZNF823P16415 610 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 SLC2A5P22732 501 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 EPHA2P29317 976 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 ENTPD1P49961 510 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 CRISP1P54107 249 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 HLXQ14774 488 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 CARTPTQ16568 116 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 TMEM236Q5W0B7 351 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 KDM4DQ6B0I6 523 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 OR2AJ1Q8NGZ0 328 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 HPS1Q92902 700 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 CDADC1Q9BWV3 514 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 GABARAPL1Q9H0R8 117 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 MSL2Q9HCI7 577 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 TMEFF2Q9UIK5 374 aaPredicted RBP13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 ZDHHC8Q9ULC8 765 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 CACNG2Q9Y698 323 aa13.67□□□□□ -0.22
SCAMP4-205ENST00000452128 SPRY3O43610 288 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 MITFO75030 526 aaPredicted RBP13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 GLCEO94923 617 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 ZNF3P17036 446 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 POU1F1P28069 291 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 BLVRAP53004 296 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 ACTR3P61158 418 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 LMO4P61968 165 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 CYB5R2Q6BCY4 276 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 PRSS45Q7RTY3 260 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 DCXRQ7Z4W1 244 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 AMIGO2Q86SJ2 522 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 HIPK1Q86Z02 1210 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 ATG16L2Q8NAA4 619 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 SNX33Q8WV41 574 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 LRTOMTQ8WZ04 291 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 ZNF556Q9HAH1 456 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 PAPOLBQ9NRJ5 636 aaKnown RBP13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 TMEM160Q9NX00 188 aa13.66□□□□□ -0.22
SCAMP4-205ENST00000452128 IGHV1-69-2A0A0G2JMI3 117 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 F5H5K5 113 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 H3BNX3 289 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 FASP25445 335 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 GZMKP49863 264 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 ESRRGP62508 458 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 PTGES3Q15185 160 aaKnown RBP13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 TSTQ16762 297 aaKnown RBP13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 PLBD1Q6P4A8 553 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 USP51Q70EK9 711 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 RHOUQ7L0Q8 258 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 PRIMA1Q86XR5 153 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 CPOQ8IVL8 374 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 BBS1Q8NFJ9 593 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 OR5L1Q8NGL2 311 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 RNF133Q8WVZ7 376 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 DIRC2Q96SL1 478 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 AMELYQ99218 206 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 PTTG3PQ9NZH4 202 aa13.65□□□□□ -0.22
SCAMP4-205ENST00000452128 ATRQ13535 2644 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 MXRA5Q9NR99 2828 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 A8MV72 311 aaPredicted RBP13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 IQCF6A8MYZ5 107 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 E9PQ18 207 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 G3V2T6 193 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 TIMM8AO60220 97 aaPredicted RBP13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 CDC14BO60729 498 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 MT-ND5P03915 603 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 GSTT1P30711 240 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 CHN2P52757 468 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 HNRNPA0Q13151 305 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 GK2Q14410 553 aaPredicted RBP13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 OR2T2Q6IF00 324 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 DPY19L4Q7Z388 723 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 SLAMF6Q96DU3 332 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 CENPNQ96H22 339 aaPredicted RBP13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 SLC30A2Q9BRI3 323 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 ABHD6Q9BV23 337 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 REPIN1Q9BWE0 567 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 YAE1D1Q9NRH1 226 aa13.64□□□□□ -0.23
SCAMP4-205ENST00000452128 CUBNO60494 3623 aa13.63□□□□□ -0.23
SCAMP4-205ENST00000452128 PLSCR5A0PG75 271 aa13.63□□□□□ -0.23
SCAMP4-205ENST00000452128 CCDC182A6NF36 153 aa13.63□□□□□ -0.23
SCAMP4-205ENST00000452128 ZAR1LA6NP61 321 aa13.63□□□□□ -0.23
SCAMP4-205ENST00000452128 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
SCAMP4-205ENST00000452128 M0R135 149 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms