RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 DNAJB9Q9UBS3 223 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 ZDHHC8Q9ULC8 765 aa11.93□□□□□ -0.5
RTFDC1-204ENST00000449062 PLSCR5A0PG75 271 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 PPIHO43447 177 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 GYPBP06028 91 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 CLUP10909 449 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 ANOS1P23352 680 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 RPS27P42677 84 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 CBX1P83916 185 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 FAM166AQ6J272 317 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 IQCF1Q8N6M8 205 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 LINC01356Q8N9X3 169 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 PROKR2Q8NFJ6 384 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 PITX2Q99697 317 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 MARCH7Q9H992 704 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 SAP30LQ9HAJ7 183 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 DECR2Q9NUI1 292 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 DDX28Q9NUL7 540 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 CDC42EP3Q9UKI2 254 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 POLR1DQ9Y2S0 133 aa11.92□□□□□ -0.5
RTFDC1-204ENST00000449062 C5orf63A6NC05 138 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 FAM157AC9JC47 383 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 TIMM8AO60220 97 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 FMO3P31513 532 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 GRK5P34947 590 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 CDK5Q00535 292 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 HNRNPA0Q13151 305 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 GINS1Q14691 196 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 CHRFAM7AQ494W8 412 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 OR2T2Q6IF00 324 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 OR2AJ1Q8NGZ0 328 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 ST7LQ8TDW4 575 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 NRBF2Q96F24 287 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 ELMOD3Q96FG2 381 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 DUS3LQ96G46 650 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 MDFIQ99750 246 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 ATF6BQ99941 703 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 DCAF16Q9NXF7 216 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
RTFDC1-204ENST00000449062 F5H5K5 113 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 ZNF593O00488 134 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 GNGT2O14610 69 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 DEAF1O75398 565 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 ATP5HO75947 161 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 FAM157CP0CG43 387 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 OSMP13725 252 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 ANXA8P13928 327 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 ZNF823P16415 610 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 RBMXP38159 391 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 CCNIQ14094 377 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 HFEQ30201 348 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 FAM120AOSQ5T036 256 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 FAHD1Q6P587 224 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 OR8G5Q8NG78 346 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 OR5L1Q8NGL2 311 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 BEX2Q9BXY8 128 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 EGLN1Q9GZT9 426 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 MMADHCQ9H3L0 296 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 YY1AP1Q9H869 796 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 MED20Q9H944 212 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 PTTG3PQ9NZH4 202 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 WIPI2Q9Y4P8 454 aa11.9□□□□□ -0.5
RTFDC1-204ENST00000449062 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 IQCF6A8MYZ5 107 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 B4DSR2 109 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 IFNGP01579 166 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 ENTPD1P49961 510 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 MVKQ03426 396 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 GK2Q14410 553 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 ZMAT1Q5H9K5 638 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 AVPI1Q5T686 147 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 SLC27A4Q6P1M0 643 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 SHQ1Q6PI26 577 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 DCXRQ7Z4W1 244 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 TEX47Q8TBZ9 253 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 CCL17Q92583 94 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 SLC30A2Q9BRI3 323 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 LPAR3Q9UBY5 353 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 IL19Q9UHD0 177 aa11.89□□□□□ -0.51
RTFDC1-204ENST00000449062 H0YL77 283 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 H3BN98 237 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 SURF4O15260 269 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 TPD52L2O43399 206 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 E2F6O75461 281 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 TIPRLO75663 272 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 LCATP04180 440 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 HMGN1P05114 100 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 POU1F1P28069 291 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 THBS2P35442 1172 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 RASSF2P50749 326 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 DAPP51397 102 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 BLVRAP53004 296 aa11.88□□□□□ -0.51
RTFDC1-204ENST00000449062 TPTEP56180 551 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms