RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 COG8Q96MW5 612 aa12.21□□□□□ -0.45
SHMT2-203ENST00000449049 LOC100509620A0A075B734 347 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 RPP14O95059 124 aaKnown RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 DBHP09172 617 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 PLA2G2AP14555 144 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 PSMB10P40306 273 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 MMP16P51512 607 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 IDH3GP51553 393 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 MLLT11Q13015 90 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF829Q3KNS6 432 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 CCDC58Q4VC31 144 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 FDX2Q6P4F2 183 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 MYPOPQ86VE0 399 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 SLC7A6Q92536 515 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 POM121L2Q96KW2 1035 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 OPALINQ96PE5 141 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 MGLLQ99685 303 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 DOK1Q99704 481 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 GRIP1Q9Y3R0 1128 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 R4GMQ9 66 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 M0R135 149 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 PNPP00491 289 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 APOC1P02654 83 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 THBDP07204 575 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 CELA3BP08861 270 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 ALDH3B2P48448 385 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 CX3CR1P49238 355 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 NR1H2P55055 460 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 TAS2R43P59537 309 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 GALK2Q01415 458 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 MFGE8Q08431 387 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 DCTN2Q13561 401 aaKnown RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 SLC30A7Q8NEW0 376 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 RPS4Y2Q8TD47 263 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF799Q96GE5 643 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 DCLRE1CQ96SD1 692 aaKnown RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 NPDC1Q9NQX5 325 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-203ENST00000449049 FAM206AQ9NX38 181 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 RHBDL2Q9NX52 303 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 NPAP1Q9NZP6 1156 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 ST6GALNAC2Q9UJ37 374 aa12.2□□□□□ -0.46
SHMT2-203ENST00000449049 IGHV1-18A0A0C4DH31 117 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 CCDC160A6NGH7 325 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 F5H5K5 113 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 OGG1O15527 345 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 PSMB9P28065 219 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 APLNRP35414 380 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 GDI2P50395 445 aaKnown RBP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 PRKXP51817 358 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 GP2P55259 537 aaKnown RBP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 HGFACQ04756 655 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 TIGD6Q17RP2 521 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 RPL22L1Q6P5R6 122 aaKnown RBP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 DRAM2Q6UX65 266 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 PRSS45Q7RTY3 260 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 WFIKKN1Q96NZ8 548 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 SIRT4Q9Y6E7 314 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 HCFC1P51610 2035 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 TMEM269A0A1B0GVZ9 245 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 CECR9P0C854 216 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 TPTEP56180 551 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF121P58317 390 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 NANOS3P60323 173 aaKnown RBP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 TBC1D28Q2M2D7 210 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 ARMCX4Q5H9R4 360 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 DMKNQ6E0U4 476 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-203ENST00000449049 CATSPERDQ86XM0 798 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF283Q8N7M2 679 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 OR2G2Q8NGZ5 317 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 MOB1AQ9H8S9 216 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 G6PC2Q9NQR9 355 aa12.19□□□□□ -0.46
SHMT2-203ENST00000449049 hCG_2014768A0A024R1R8 64 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 C5orf49A4QMS7 147 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 ACOD1A6NK06 481 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 LOC110117498-PIK3R3F6TDL0 507 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 CPEP16870 476 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 CCR9P51686 369 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 TPBGQ13641 420 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 ALKBH1Q13686 389 aaKnown RBP12.18□□□□□ -0.46
SHMT2-203ENST00000449049 WDR38Q5JTN6 314 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 NAA40Q86UY6 237 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 PRSS35Q8N3Z0 413 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 IL17RDQ8NFM7 739 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 OR1J2Q8NGS2 313 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 C4orf45Q96LM5 186 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 MED18Q9BUE0 208 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 FRRS1LQ9P0K9 344 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 NDRG3Q9UGV2 375 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 OR52A1Q9UKL2 312 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 RELNP78509 3460 aa12.18□□□□□ -0.46
SHMT2-203ENST00000449049 PLPP2O43688 288 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ICMTO60725 284 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 CD1AP06126 327 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms