RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 MARS2Q96GW9 593 aaKnown RBP12.45□□□□□ -0.42
USP39-206ENST00000448971 COG8Q96MW5 612 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
USP39-206ENST00000448971 DCLRE1CQ96SD1 692 aaKnown RBP12.45□□□□□ -0.42
USP39-206ENST00000448971 HCAR1Q9BXC0 346 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 GABARAPL1Q9H0R8 117 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 OR51V1Q9H2C8 321 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 WDR76Q9H967 626 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 SLC25A19Q9HC21 320 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 HINT3Q9NQE9 182 aaKnown RBP12.45□□□□□ -0.42
USP39-206ENST00000448971 TBCCD1Q9NVR7 557 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 CYB5R1Q9UHQ9 305 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 SAC3D1A6NKF1 404 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 F5H5K5 113 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 J3QW42 95 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 NDUFS8O00217 210 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
USP39-206ENST00000448971 TIMM8AO60220 97 aaPredicted RBP12.44□□□□□ -0.42
USP39-206ENST00000448971 IGHV3-13P01766 116 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 IGFBP5P24593 272 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 CRISP1P54107 249 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 CDK5Q00535 292 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 LOXL1Q08397 574 aaPredicted RBP12.44□□□□□ -0.42
USP39-206ENST00000448971 ECH1Q13011 328 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 KLHL12Q53G59 568 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 DCXRQ7Z4W1 244 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 ERI1Q8IV48 349 aaKnown RBP12.44□□□□□ -0.42
USP39-206ENST00000448971 GTF3AQ92664 365 aaKnown RBP12.44□□□□□ -0.42
USP39-206ENST00000448971 CENPNQ96H22 339 aaPredicted RBP12.44□□□□□ -0.42
USP39-206ENST00000448971 MAP6Q96JE9 813 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 INTS14Q96SY0 518 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 COPS4Q9BT78 406 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 TVP23BQ9NYZ1 205 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 ENOPH1Q9UHY7 261 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 OAZ3Q9UMX2 235 aa12.44□□□□□ -0.42
USP39-206ENST00000448971 ARFGEF3Q5TH69 2177 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 C17orf100A8MU93 164 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 MITFO75030 526 aaPredicted RBP12.43□□□□□ -0.42
USP39-206ENST00000448971 GLCEO94923 617 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 PSKH1P11801 424 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 GSTT1P30711 240 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 THBS2P35442 1172 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 MAGEB1P43366 347 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 SLC6A9P48067 706 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 ZNF81P51508 661 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 ESRRGP62508 458 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 GGTLC2Q14390 218 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 TAF13Q15543 124 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 SNAPC1Q16533 368 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 ZMAT1Q5H9K5 638 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 ZFP1Q6P2D0 407 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 UBASH3BQ8TF42 649 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 SPTSSAQ969W0 71 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 APOBEC3DQ96AK3 386 aaPredicted RBP12.43□□□□□ -0.42
USP39-206ENST00000448971 BPESC1Q9GZL8 116 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 POFUT1Q9H488 388 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
USP39-206ENST00000448971 PTTG3PQ9NZH4 202 aa12.43□□□□□ -0.42
USP39-206ENST00000448971 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.43□□□□□ -0.42
USP39-206ENST00000448971 CGGBP1Q9UFW8 167 aaPredicted RBP12.43□□□□□ -0.42
USP39-206ENST00000448971 ZNF878C9JN71 531 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 M0R135 149 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 ZNF593O00488 134 aaPredicted RBP12.42□□□□□ -0.42
USP39-206ENST00000448971 PRODHO43272 600 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 NCR1O76036 304 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 HPXP02790 462 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 TUBG1P23258 451 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 TPTEP56180 551 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 CCL8P80075 99 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 EIF2B1Q14232 305 aaKnown RBP12.42□□□□□ -0.42
USP39-206ENST00000448971 PTGES3Q15185 160 aaKnown RBP12.42□□□□□ -0.42
USP39-206ENST00000448971 TSTQ16762 297 aaKnown RBP12.42□□□□□ -0.42
USP39-206ENST00000448971 PCGF3Q3KNV8 242 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 LINC01590Q5TEZ4 76 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 SPATC1Q76KD6 591 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 CPOQ8IVL8 374 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 OR5L1Q8NGL2 311 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 SLAMF6Q96DU3 332 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 ZMYND19Q96E35 227 aaPredicted RBP12.42□□□□□ -0.42
USP39-206ENST00000448971 ZNF799Q96GE5 643 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 CIB1Q99828 191 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 BEX2Q9BXY8 128 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 SAP30LQ9HAJ7 183 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 TUBG2Q9NRH3 451 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 CYSLTR2Q9NS75 346 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 CENPMQ9NSP4 180 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 DECR2Q9NUI1 292 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 STARD10Q9Y365 291 aa12.42□□□□□ -0.42
USP39-206ENST00000448971 ZSCAN5BA6NJL1 495 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 LYNX1G3V0Z9 82 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 SPRY3O43610 288 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 ACSM4P0C7M7 580 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 LYNX1P0DP58 116 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 NAA10P41227 235 aaPredicted RBP12.41□□□□□ -0.42
USP39-206ENST00000448971 NR4A2P43354 598 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
USP39-206ENST00000448971 LCN1P1Q5VSP4 162 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms