RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DCUN1D4Q92564 292 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 RRNAD1Q96FB5 475 aaKnown RBP12.71□□□□□ -0.37
ERCC3-203ENST00000445889 TWSG1Q9GZX9 223 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 HHLA2Q9UM44 414 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 TPPPO94811 219 aa12.71□□□□□ -0.38
ERCC3-203ENST00000445889 HOXC4P09017 264 aaPredicted RBP12.71□□□□□ -0.38
ERCC3-203ENST00000445889 NFYBP25208 207 aa12.71□□□□□ -0.38
ERCC3-203ENST00000445889 SERPINF1P36955 418 aa12.71□□□□□ -0.38
ERCC3-203ENST00000445889 H3F3CQ6NXT2 135 aa12.71□□□□□ -0.38
ERCC3-203ENST00000445889 KCTD18Q6PI47 426 aaPredicted RBP12.71□□□□□ -0.38
ERCC3-203ENST00000445889 MAMDC2Q7Z304 686 aaPredicted RBP12.71□□□□□ -0.38
ERCC3-203ENST00000445889 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.38
ERCC3-203ENST00000445889 KCNK7Q9Y2U2 307 aa12.71□□□□□ -0.38
ERCC3-203ENST00000445889 TRAV36DV7A0A075B6V5 113 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 OR2T1O43869 369 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 NSA2O95478 260 aaKnown RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 GABRG2P18507 467 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 PPICP45877 212 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 NPY4RP50391 375 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 IGLV3-21P80748 117 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 SCRN3Q0VDG4 424 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF345Q14585 488 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 SVBPQ8N300 66 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 OR5AP2Q8NGF4 316 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 OR52N5Q8NH56 324 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 MAFIPQ8WZ33 124 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 ADAT3Q96EY9 351 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 PHB2Q99623 299 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 CMSS1Q9BQ75 279 aaKnown RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 BANF2Q9H503 90 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 ESRP2Q9H6T0 727 aaKnown RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 VDAC3Q9Y277 283 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 CABIN1Q9Y6J0 2220 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 KIR2DS5A0A0G2JLQ3 304 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 A0A0G2JNG1 304 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 MSGN1A6NI15 193 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 KIR2DS3K7RE56 304 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 SULT1C2O00338 296 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 FARS2O95363 451 aaKnown RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 SLC25A4P12235 298 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF823P16415 610 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 KIR2DS5Q14953 304 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 HFEQ30201 348 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 OR5T2Q8NGG2 359 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 FOXRED1Q96CU9 486 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 EDEM2Q9BV94 578 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-203ENST00000445889 MKL2Q9ULH7 1088 aa12.7□□□□□ -0.38
ERCC3-203ENST00000445889 UNC13CQ8NB66 2214 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 TMEM200CA6NKL6 621 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 H3BML4 177 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 PHYHO14832 338 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 MELTFP08582 738 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 GP1BBP13224 206 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 MYF5P13349 255 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 IGFBP3P17936 291 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-203ENST00000445889 RORAP35398 523 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 NPBWR1P48145 328 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 HSD17B7P56937 341 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 GLO1Q04760 184 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 CCINQ13939 588 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 SLC25A42Q86VD7 318 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 COMMD2Q86X83 199 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 C9orf40Q8IXQ3 194 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF101Q8IZC7 436 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 HRH4Q9H3N8 390 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 CHMP1AQ9HD42 196 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-203ENST00000445889 G6PC2Q9NQR9 355 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 SLC17A5Q9NRA2 495 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF217O75362 1048 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 IFNA6P05013 189 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
ERCC3-203ENST00000445889 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 NSDHLQ15738 373 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 RSPO4Q2I0M5 234 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF260Q3ZCT1 412 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 CCDC157Q569K6 752 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 NKAPLQ5M9Q1 402 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 SLC26A10Q8NG04 563 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 OR4K17Q8NGC6 315 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF519Q8TB69 540 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 LRRC61Q9BV99 259 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 ZNF629Q9UEG4 869 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-203ENST00000445889 PIAS3Q9Y6X2 628 aa12.69□□□□□ -0.38
ERCC3-203ENST00000445889 SPTY2D1-AS1A0A0U1RR47 76 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 H0YIZ8 118 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 EFSO43281 561 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 HTR3BO95264 441 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 CD74P04233 296 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 ABOP16442 354 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 AKR1C3P42330 323 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 KCNJ3P48549 501 aa12.68□□□□□ -0.38
ERCC3-203ENST00000445889 AIMP2Q13155 320 aaKnown RBP12.68□□□□□ -0.38
ERCC3-203ENST00000445889 TMEM104Q8NE00 496 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms