RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TMEM163Q8TC26 289 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 FAM168AQ92567 244 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 APOBEC3DQ96AK3 386 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-205ENST00000440514 C18orf12Q96KH6 178 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 COG8Q96MW5 612 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 IL4I1Q96RQ9 567 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 MS4A5Q9H3V2 200 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 CENPMQ9NSP4 180 aa15.41■□□□□ 0.06
CPSF4-205ENST00000440514 MAP1AP78559 2803 aaPredicted RBP15.41■□□□□ 0.06
CPSF4-205ENST00000440514 TEP1Q99973 2627 aaKnown RBP15.41■□□□□ 0.06
CPSF4-205ENST00000440514 ZSCAN5BA6NJL1 495 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 ZNF878C9JN71 531 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 M0R135 149 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 TLX2O43763 284 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-205ENST00000440514 MRPL3P09001 348 aaKnown RBP15.4■□□□□ 0.06
CPSF4-205ENST00000440514 MAGEB1P43366 347 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 MMP15P51511 669 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 PRSS12P56730 875 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 PSG7Q13046 419 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 HLXQ14774 488 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-205ENST00000440514 ZIK1Q3SY52 487 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-205ENST00000440514 MAPK1IP1LQ8NDC0 245 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 C10orf105Q8TEF2 133 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 NEU4Q8WWR8 484 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-205ENST00000440514 SPTSSAQ969W0 71 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 ZNF799Q96GE5 643 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 SMR3AQ99954 134 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 RHNO1Q9BSD3 238 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 ABHD6Q9BV23 337 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 C1QTNF5Q9BXJ0 243 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 GPR160Q9UJ42 338 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 KLHDC2Q9Y2U9 406 aa15.4■□□□□ 0.06
CPSF4-205ENST00000440514 CHD3Q12873 2000 aaKnown RBP15.39■□□□□ 0.05
CPSF4-205ENST00000440514 ERICH4A6NGS2 130 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 C17orf100A8MU93 164 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 LYNX1G3V0Z9 82 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 J3QW42 95 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 TIMM8AO60220 97 aaPredicted RBP15.39■□□□□ 0.05
CPSF4-205ENST00000440514 HPXP02790 462 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 LCATP04180 440 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 INHBBP09529 407 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 CSF3P09919 207 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 LYNX1P0DP58 116 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 DAOP14920 347 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 OTX1P32242 354 aaPredicted RBP15.39■□□□□ 0.05
CPSF4-205ENST00000440514 SLC6A9P48067 706 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 PDLIM4P50479 330 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 PRKXP51817 358 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 TPTEP56180 551 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 DSCR9P59020 149 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 EFNB1P98172 346 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 TAF13Q15543 124 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 MOGQ16653 247 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 LCN1P1Q5VSP4 162 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 COLCA1Q6ZS62 124 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 SHFQ7M4L6 423 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 EME1Q96AY2 570 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 CMBLQ96DG6 245 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 MBOAT4Q96T53 435 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 SLC29A1Q99808 456 aa15.39■□□□□ 0.05
CPSF4-205ENST00000440514 PURGQ9UJV8 347 aaKnown RBP15.39■□□□□ 0.05
CPSF4-205ENST00000440514 CR1P17927 2039 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 C5orf63A6NC05 138 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 SLC2A1P11166 492 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 FOSL1P15407 271 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 ZNF81P51508 661 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 RCN1Q15293 331 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 SNAI3Q3KNW1 292 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 AADACL4Q5VUY2 407 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 OTOSQ8NHW6 89 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 RNF133Q8WVZ7 376 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 TEAD3Q99594 435 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 KCNJ15Q99712 375 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 REG4Q9BYZ8 158 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 GSX1Q9H4S2 264 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-205ENST00000440514 MSL2Q9HCI7 577 aa15.38■□□□□ 0.05
CPSF4-205ENST00000440514 MYOZ1Q9NP98 299 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-205ENST00000440514 H2AFY2Q9P0M6 372 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-205ENST00000440514 PLSCR5A0PG75 271 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 SPRY3O43610 288 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 IGHV1-46P01743 117 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 MT-ND5P03915 603 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 LYNP07948 512 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 KITLGP21583 273 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 HCCSP53701 268 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 CCL8P80075 99 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 TSTQ16762 297 aaKnown RBP15.37■□□□□ 0.05
CPSF4-205ENST00000440514 NXNL2Q5VZ03 156 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 FBXW12Q6X9E4 464 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 ZBTB49Q6ZSB9 765 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 MEPCEQ7L2J0 689 aaKnown RBP15.37■□□□□ 0.05
CPSF4-205ENST00000440514 SLC16A9Q7RTY1 509 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 OR5AS1Q8N127 324 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 ZNF283Q8N7M2 679 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 OR5L1Q8NGL2 311 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 FAM81AQ8TBF8 368 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 UBASH3BQ8TF42 649 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 TRUB1Q8WWH5 349 aaKnown RBP15.37■□□□□ 0.05
CPSF4-205ENST00000440514 HAVCR1Q96D42 359 aa15.37■□□□□ 0.05
CPSF4-205ENST00000440514 RDH12Q96NR8 316 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms