RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CSRP2Q16527 193 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 PDSS1Q5T2R2 415 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 STPG1Q5TH74 334 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 IMMP1LQ96LU5 166 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 CHCHD2Q9Y6H1 151 aaPredicted RBP12.64□□□□□ -0.39
LIMD1-202ENST00000440097 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 FREM3P0C091 2139 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF208O43345 1280 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 MPZL1O95297 269 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 NAT2P11245 290 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 CRABP1P29762 137 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 ALKBH1Q13686 389 aaKnown RBP12.64□□□□□ -0.39
LIMD1-202ENST00000440097 PABPC1L2AQ5JQF8 200 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 RPS19BP1Q86WX3 136 aaKnown RBP12.64□□□□□ -0.39
LIMD1-202ENST00000440097 PXT1Q8NFP0 134 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 OR2M3Q8NG83 312 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 CMTM3Q96MX0 182 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 AMELYQ99218 206 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 UTP23Q9BRU9 249 aaKnown RBP12.64□□□□□ -0.39
LIMD1-202ENST00000440097 IFT22Q9H7X7 185 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 FRRS1LQ9P0K9 344 aa12.64□□□□□ -0.39
LIMD1-202ENST00000440097 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 B4E171 279 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 GOSR2O14653 212 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 EFNA2O43921 213 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 SRMP19623 302 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 DPP4P27487 766 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 AVPR2P30518 371 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 TSPAN7P41732 249 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 RPS15P62841 145 aaKnown RBP12.63□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF528Q3MIS6 628 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM69Q5SWH9 247 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 DCAF12L2Q5VW00 463 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 NDUFAF7Q7L592 441 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 WDSUB1Q8N9V3 476 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 RNF166Q96A37 237 aaPredicted RBP12.63□□□□□ -0.39
LIMD1-202ENST00000440097 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
LIMD1-202ENST00000440097 COMMD4Q9H0A8 199 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 ELOVL3Q9HB03 270 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 FOXJ3Q9UPW0 622 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 ANKRD61A6NGH8 418 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 LIPT2A6NK58 231 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 F5H5P2 479 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 UPK3AO75631 287 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF883P0CG24 379 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 BIDP55957 195 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM176BQ3YBM2 270 aaPredicted RBP12.63□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF684Q5T5D7 378 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 TMEM225Q6GV28 225 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 SLC18B1Q6NT16 456 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 C6orf15Q6UXA7 325 aaPredicted RBP12.63□□□□□ -0.39
LIMD1-202ENST00000440097 OR5T2Q8NGG2 359 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 SYNPRQ8TBG9 265 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 GNRHR2Q96P88 292 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 ALKBH4Q9NXW9 302 aa12.63□□□□□ -0.39
LIMD1-202ENST00000440097 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 A6NIZ1 184 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 IFITM5A6NNB3 132 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 RAD1O60671 282 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 AQP8O94778 261 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 CCL3P10147 92 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF823P16415 610 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 MECP2P51608 486 aaKnown RBP12.62□□□□□ -0.39
LIMD1-202ENST00000440097 RAP1BP61224 184 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 RAP1AP62834 184 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 EGR3Q06889 387 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 EIF2B1Q14232 305 aaKnown RBP12.62□□□□□ -0.39
LIMD1-202ENST00000440097 DNAAF1Q8NEP3 725 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 POC1BQ8TC44 478 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 M1APQ8TC57 530 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 MNTQ99583 582 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 C12orf57Q99622 126 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 MFRPQ9BY79 579 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 VSX1Q9NZR4 365 aaPredicted RBP12.62□□□□□ -0.39
LIMD1-202ENST00000440097 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
LIMD1-202ENST00000440097 TCFL5Q9UL49 500 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 EML6Q6ZMW3 1958 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 PHYHO14832 338 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 PIN1P1O15428 100 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 FAM74A1Q5RGS3 127 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 RAET1LQ5VY80 246 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 DNM1P34Q6PK57 102 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 SLC36A1Q7Z2H8 476 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 BPIFCQ8NFQ6 507 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 OR10K1Q8NGX5 313 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 ASB10Q8WXI3 467 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 S100A16Q96FQ6 103 aaKnown RBP12.62□□□□□ -0.39
LIMD1-202ENST00000440097 MFFQ9GZY8 342 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 SLITRK2Q9H156 845 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 FAM86C1Q9NVL1 165 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 MRPL22Q9NWU5 206 aaKnown RBP12.62□□□□□ -0.39
LIMD1-202ENST00000440097 ZMAT5Q9UDW3 170 aaKnown RBP12.62□□□□□ -0.39
LIMD1-202ENST00000440097 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
LIMD1-202ENST00000440097 IGLV1-36A0A0B4J1U3 117 aa12.61□□□□□ -0.39
LIMD1-202ENST00000440097 RLN1P04808 185 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms