RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF275Q9NSD4 429 aaPredicted RBP20.12■□□□□ 0.81
VARS-217ENST00000440048 PTTG3PQ9NZH4 202 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 KIF17Q9P2E2 1029 aa20.12■□□□□ 0.81
VARS-217ENST00000440048 LRP5LA4QPB2 252 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 TPD52L2O43399 206 aaKnown RBP20.11■□□□□ 0.81
VARS-217ENST00000440048 CDC14BO60729 498 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 HMGN1P05114 100 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 SPARCP09486 303 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 DAPP51397 102 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 BLVRAP53004 296 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 TRIP10Q15642 601 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 PCK2Q16822 640 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 FAM209AQ5JX71 171 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 C6orf52Q5T4I8 152 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 CYB5R2Q6BCY4 276 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 COLCA1Q6ZS62 124 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 DNAJC9Q8WXX5 260 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 C1QTNF5Q9BXJ0 243 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 PAPOLBQ9NRJ5 636 aaKnown RBP20.11■□□□□ 0.81
VARS-217ENST00000440048 ATRQ13535 2644 aa20.11■□□□□ 0.81
VARS-217ENST00000440048 ZNF593O00488 134 aaPredicted RBP20.1■□□□□ 0.81
VARS-217ENST00000440048 SURF4O15260 269 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 ADH4P08319 380 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 RAC2P15153 192 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 PAICSP22234 425 aaKnown RBP20.1■□□□□ 0.81
VARS-217ENST00000440048 FASP25445 335 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 CRYBB2P43320 205 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 GPR6P46095 362 aaPredicted RBP20.1■□□□□ 0.81
VARS-217ENST00000440048 GZMKP49863 264 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 CHN2P52757 468 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 TMEM33P57088 247 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 HLXQ14774 488 aaPredicted RBP20.1■□□□□ 0.81
VARS-217ENST00000440048 ZMAT1Q5H9K5 638 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 TEX30Q5JUR7 227 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 TMEM236Q5W0B7 351 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 FBXW12Q6X9E4 464 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 USP51Q70EK9 711 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 DCXRQ7Z4W1 244 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 NAA40Q86UY6 237 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 SAP30LQ9HAJ7 183 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 SLC25A19Q9HC21 320 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 DDX28Q9NUL7 540 aaKnown RBP20.1■□□□□ 0.81
VARS-217ENST00000440048 ZDHHC8Q9ULC8 765 aa20.1■□□□□ 0.81
VARS-217ENST00000440048 IGHV1-69-2A0A0G2JMI3 117 aa20.09■□□□□ 0.81
VARS-217ENST00000440048 CDK5R2Q13319 367 aa20.09■□□□□ 0.81
VARS-217ENST00000440048 PLBD1Q6P4A8 553 aa20.09■□□□□ 0.81
VARS-217ENST00000440048 AMIGO2Q86SJ2 522 aa20.09■□□□□ 0.81
VARS-217ENST00000440048 HIPK1Q86Z02 1210 aa20.09■□□□□ 0.81
VARS-217ENST00000440048 DIRC2Q96SL1 478 aa20.09■□□□□ 0.81
VARS-217ENST00000440048 OR51V1Q9H2C8 321 aa20.09■□□□□ 0.81
VARS-217ENST00000440048 A8MV72 311 aaPredicted RBP20.08■□□□□ 0.81
VARS-217ENST00000440048 PRR23D1E9PI22 279 aaPredicted RBP20.08■□□□□ 0.81
VARS-217ENST00000440048 G3V2T6 193 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 PPIHO43447 177 aaKnown RBP20.08■□□□□ 0.81
VARS-217ENST00000440048 GLCEO94923 617 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 PRR23D2P0DMB1 279 aaPredicted RBP20.08■□□□□ 0.81
VARS-217ENST00000440048 FCGR1AP12314 374 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 ZNF16P17020 682 aaPredicted RBP20.08■□□□□ 0.81
VARS-217ENST00000440048 IL2RGP31785 369 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 CRISP1P54107 249 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 TPTEP56180 551 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 Q6ZR03 302 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 PARP8Q8N3A8 854 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 LRTOMTQ8WZ04 291 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 SPTSSAQ969W0 71 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 MSI2Q96DH6 328 aaKnown RBP20.08■□□□□ 0.81
VARS-217ENST00000440048 EGLN1Q9GZT9 426 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 CACNG2Q9Y698 323 aa20.08■□□□□ 0.81
VARS-217ENST00000440048 TANC2Q9HCD6 1990 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 M0R135 149 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 LCATP04180 440 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 CD55P08174 381 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 GSTT1P30711 240 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 SPRNQ5BIV9 151 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 OR2T2Q6IF00 324 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 ERI1Q8IV48 349 aaKnown RBP20.07■□□□□ 0.8
VARS-217ENST00000440048 CPOQ8IVL8 374 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 OR5AS1Q8N127 324 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 ST7LQ8TDW4 575 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 HPS1Q92902 700 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 SLAMF6Q96DU3 332 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 ELMOD3Q96FG2 381 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 ZNF799Q96GE5 643 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 PLEKHA8Q96JA3 519 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 INTS14Q96SY0 518 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 SOX7Q9BT81 388 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 TEX12Q9BXU0 123 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 MARCH7Q9H992 704 aa20.07■□□□□ 0.8
VARS-217ENST00000440048 CRLF1O75462 422 aa20.06■□□□□ 0.8
VARS-217ENST00000440048 OTX1P32242 354 aaPredicted RBP20.06■□□□□ 0.8
VARS-217ENST00000440048 TNFAIP6P98066 277 aaPredicted RBP20.06■□□□□ 0.8
VARS-217ENST00000440048 ZDHHC13Q8IUH4 622 aa20.06■□□□□ 0.8
VARS-217ENST00000440048 OR6N2Q8NGY6 317 aa20.06■□□□□ 0.8
VARS-217ENST00000440048 ZMYND19Q96E35 227 aaPredicted RBP20.06■□□□□ 0.8
VARS-217ENST00000440048 COPS4Q9BT78 406 aa20.06■□□□□ 0.8
VARS-217ENST00000440048 GABARAPL1Q9H0R8 117 aa20.06■□□□□ 0.8
VARS-217ENST00000440048 CENPMQ9NSP4 180 aa20.06■□□□□ 0.8
VARS-217ENST00000440048 COL6A5A8TX70 2615 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 WNT9BO14905 357 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 MITFO75030 526 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms