RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 KLK2P20151 261 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ZP3P21754 424 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 MPGP29372 298 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ATP1B3P54709 279 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ADAD2Q8NCV1 583 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 OR10H5Q8NGA6 315 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 PPP1R1CQ8WVI7 109 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 MRGPRFQ96AM1 343 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 MVB12AQ96EY5 273 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 KCNK17Q96T54 332 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 SLC17A5Q9NRA2 495 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 PRR13Q9NZ81 148 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 FER1L5A0AVI2 2057 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 A0A1W2PP11 408 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 LDLRAD4O15165 306 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 DUX1O43812 170 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 CFAP77Q6ZQR2 320 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF101Q8IZC7 436 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 D2HGDHQ8N465 521 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 OR5M9Q8NGP3 310 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 TMEM234Q8WY98 164 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 SLC25A21Q9BQT8 299 aaPredicted RBP12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 PPA2Q9H2U2 334 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 C13orf42A0A1B0GVH6 325 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 VSIG8P0DPA2 414 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 BDKRB2P30411 391 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 CD96P40200 585 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 NXPH1P58417 271 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 RSPO4Q2I0M5 234 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 OGFOD3Q6PK18 319 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF813Q6ZN06 617 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 ANGPTL5Q86XS5 388 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 OR10S1Q8NGN2 331 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 THRSPQ92748 146 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF501Q96CX3 271 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF471Q9BX82 626 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 PBOV1Q9GZY1 135 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 C1orf198Q9H425 327 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 BANF2Q9H503 90 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF576Q9H609 170 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 METTL21EPA6NDL7 271 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 OR2AT4A6NND4 320 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 CDK2AP1O14519 115 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 TPPPO94811 219 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 FSTP19883 344 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 PI3P19957 117 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 BCKDHBP21953 392 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 SFTPDP35247 375 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 IL13RA1P78552 427 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 TDGQ13569 410 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 TMEM244Q5VVB8 128 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 AWAT2Q6E213 333 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 UNQ6126/PRO20091Q6UXV3 157 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF704Q6ZNC4 412 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 BVESQ8NE79 360 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 ST8SIA2Q92186 375 aa12.06□□□□□ -0.48
HERPUD1-204ENST00000439977 TRBV11-1A0A0K0K1C0 115 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 MEGF11A6BM72 1044 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 OR14I1A6ND48 311 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 ERCC1P07992 297 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 RPA2P15927 270 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 CFPP27918 469 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 TAGLNQ01995 201 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 KLHL24Q6TFL4 600 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 FAM71F1Q96KD3 344 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 VRK1Q99986 396 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 ALX4Q9H161 411 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 SERINC1Q9NRX5 453 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 KCNK7Q9Y2U2 307 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 PHF3Q92576 2039 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 A8MXK9 166 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF814B7Z6K7 855 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 RAMP1O60894 148 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 STK17BO94768 372 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 HEXBP07686 556 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 DAP3P51398 398 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 C17orf67Q0P5P2 114 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 MYBPHQ13203 477 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 ABHD12BQ7Z5M8 362 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 OR5D18Q8NGL1 313 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 OR5M8Q8NGP6 311 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 OR6K3Q8NGY3 331 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 NPRL2Q8WTW4 380 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 OIT3Q8WWZ8 545 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 CHST11Q9NPF2 352 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 COMMD9Q9P000 198 aa12.05□□□□□ -0.48
HERPUD1-204ENST00000439977 VSTM2BA6NLU5 285 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 RER1O15258 196 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 IGHMP01871 453 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 STARP49675 285 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 AKR1C2P52895 323 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
HERPUD1-204ENST00000439977 MPPED2Q15777 294 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms