RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ATF6BQ99941 703 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 C1QTNF5Q9BXJ0 243 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 C7orf69Q9H7B7 122 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 PATZ1Q9HBE1 687 aaKnown RBP13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 GCM1Q9NP62 436 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 ACTR3BQ9P1U1 418 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 OPN4Q9UHM6 478 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 CYB5R1Q9UHQ9 305 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 KCNG2Q9UJ96 466 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 PCDHB10Q9UN67 800 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 LYVE1Q9Y5Y7 322 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 CDH10Q9Y6N8 788 aa13.71□□□□□ -0.21
SNRPD3-204ENST00000439775 A8MXK9 166 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 F5H0A9 414 aaPredicted RBP13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 TMEM178BH3BS89 294 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 ACSM4P0C7M7 580 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 SELEP16581 610 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 ZFP36P26651 326 aaKnown RBP13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 GGT2P36268 569 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 MDH2P40926 338 aaKnown RBP13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 GYS2P54840 703 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 MXRA7P84157 204 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 ZMYND11Q15326 602 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 RSPO1Q2MKA7 263 aaPredicted RBP13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 OR2T2Q6IF00 324 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 LINC00346Q8IVM7 164 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 MUC20Q8N307 709 aaPredicted RBP13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 ATG16L2Q8NAA4 619 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 OR10AD1Q8NGE0 317 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 OR52L1Q8NGH7 329 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 OR2AJ1Q8NGZ0 328 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 PITX2Q99697 317 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 SLC30A2Q9BRI3 323 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 BTBD10Q9BSF8 475 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 CDADC1Q9BWV3 514 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 TRIM15Q9C019 465 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 FN3KQ9H479 309 aa13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 PNRC2Q9NPJ4 139 aaKnown RBP13.7□□□□□ -0.22
SNRPD3-204ENST00000439775 HAX1O00165 279 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 BHLHE40O14503 412 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 ADRA2CP18825 462 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 ATP6V1B2P21281 511 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 CPT2P23786 658 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 SRP9P49458 86 aaKnown RBP13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 DBPQ10586 325 aaPredicted RBP13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 TRAP1Q12931 704 aaKnown RBP13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 ZNF181Q2M3W8 571 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 ZNF770Q6IQ21 691 aaPredicted RBP13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 ARHGAP24Q8N264 748 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 OR9Q2Q8NGE9 314 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 OR52E2Q8NGJ4 325 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 OR4C15Q8NGM1 316 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 MEGF10Q96KG7 1140 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 JMJD8Q96S16 334 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 SUCNR1Q9BXA5 334 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 HCAR1Q9BXC0 346 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 EGLN3Q9H6Z9 239 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 MRPL22Q9NWU5 206 aaKnown RBP13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 IL20Q9NYY1 176 aa13.69□□□□□ -0.22
SNRPD3-204ENST00000439775 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 MLNRO43193 412 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 FSTL3O95633 263 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 HLA-DQA2P01906 255 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 SLC6A9P48067 706 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 CLEC12AQ5QGZ9 265 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 SLC35F1Q5T1Q4 408 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 CYP2R1Q6VVX0 501 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 RASSF6Q6ZTQ3 369 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 BHLHE23Q8NDY6 225 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 DEFB108BQ8NET1 73 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 OR2T4Q8NH00 348 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 FAM216AQ8WUB2 273 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 DDOQ99489 341 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 MUC13Q9H3R2 512 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 MAGIXQ9H6Y5 334 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 DYSFO75923 2080 aa13.68□□□□□ -0.22
SNRPD3-204ENST00000439775 TCRBV5S2A0A599 114 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 CEACAM18A8MTB9 384 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 F5H5K5 113 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 TRIM77I1YAP6 450 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 ZNF12P17014 697 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 RBMXP38159 391 aaKnown RBP13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 GATA4P43694 442 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 SEC61A1P61619 476 aaKnown RBP13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 MALLQ13021 153 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 GK2Q14410 553 aaPredicted RBP13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 ESCO2Q56NI9 601 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 LCN8Q6JVE9 175 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 BPIFB2Q8N4F0 458 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 CELF2-AS1Q8N7Q2 184 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 POP5Q969H6 163 aaKnown RBP13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 MAP6Q96JE9 813 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 SLC6A7Q99884 636 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 RBM4Q9BWF3 364 aaKnown RBP13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 PLA2G12AQ9BZM1 189 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 WDR76Q9H967 626 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 DDX28Q9NUL7 540 aaKnown RBP13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 LRCH1Q9Y2L9 728 aa13.67□□□□□ -0.22
SNRPD3-204ENST00000439775 LRRC30A6NM36 301 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms