RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 PNRC2Q9NPJ4 139 aaKnown RBP20.43■□□□□ 0.86
CPNE1-217ENST00000439669 KIF17Q9P2E2 1029 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 KCNS2Q9ULS6 477 aa20.43■□□□□ 0.86
CPNE1-217ENST00000439669 NIPBLQ6KC79 2804 aaeCLIP20.42■□□□□ 0.861e-8■□□□□ 10.5
CPNE1-217ENST00000439669 FAM183AA6NL82 134 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 ACSM4P0C7M7 580 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 OSMP13725 252 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 RAC2P15153 192 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 ENTPD1P49961 510 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 GINS1Q14691 196 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 HLXQ14774 488 aaPredicted RBP20.42■□□□□ 0.86
CPNE1-217ENST00000439669 HFEQ30201 348 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 SHQ1Q6PI26 577 aaKnown RBP20.42■□□□□ 0.86
CPNE1-217ENST00000439669 SOX7Q9BT81 388 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 MED20Q9H944 212 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 CACNG2Q9Y698 323 aa20.42■□□□□ 0.86
CPNE1-217ENST00000439669 LMX1BO60663 402 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 TGFAP01135 160 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 ADH4P08319 380 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 PSKH1P11801 424 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 PAICSP22234 425 aaKnown RBP20.41■□□□□ 0.86
CPNE1-217ENST00000439669 BLVRAP53004 296 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 TNFAIP6P98066 277 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-217ENST00000439669 RSPO1Q2MKA7 263 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-217ENST00000439669 KRTAP27-1Q3LI81 207 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 DCXRQ7Z4W1 244 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 OR5AS1Q8N127 324 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 CLDND2Q8NHS1 167 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 NTN4Q9HB63 628 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 TREM2Q9NZC2 230 aa20.41■□□□□ 0.86
CPNE1-217ENST00000439669 CLDN25C9JDP6 229 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 LCATP04180 440 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 TNFSF4P23510 183 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 SLC6A9P48067 706 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 TPTEP56180 551 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 CHRFAM7AQ494W8 412 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 AVPI1Q5T686 147 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 ACSM5Q6NUN0 579 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 FBXW12Q6X9E4 464 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 HIPK1Q86Z02 1210 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 OR2Z1Q8NG97 314 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 OR10S1Q8NGN2 331 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 CCL17Q92583 94 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 SPTSSAQ969W0 71 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 NRBF2Q96F24 287 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 HCAR1Q9BXC0 346 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 C1QTNF5Q9BXJ0 243 aa20.4■□□□□ 0.86
CPNE1-217ENST00000439669 M0R135 149 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 ZNF593O00488 134 aaPredicted RBP20.39■□□□□ 0.85
CPNE1-217ENST00000439669 WNT9BO14905 357 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 CIB2O75838 187 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 CD55P08174 381 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 MVKQ03426 396 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 CDK5R2Q13319 367 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 OR2T2Q6IF00 324 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 Q6ZR03 302 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 COLCA1Q6ZS62 124 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 UTP4Q969X6 686 aaKnown RBP20.39■□□□□ 0.85
CPNE1-217ENST00000439669 ZNF799Q96GE5 643 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 COPS4Q9BT78 406 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 OR51V1Q9H2C8 321 aa20.39■□□□□ 0.85
CPNE1-217ENST00000439669 DDX28Q9NUL7 540 aaKnown RBP20.39■□□□□ 0.85
CPNE1-217ENST00000439669 PRR23D1E9PI22 279 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-217ENST00000439669 HMGN1P05114 100 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 PRR23D2P0DMB1 279 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-217ENST00000439669 MALLQ13021 153 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 TAF13Q15543 124 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 ATP6AP1Q15904 470 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 SPRNQ5BIV9 151 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 LINC01590Q5TEZ4 76 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 PLBD1Q6P4A8 553 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 NAA40Q86UY6 237 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 PRIMA1Q86XR5 153 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 ERI1Q8IV48 349 aaKnown RBP20.38■□□□□ 0.85
CPNE1-217ENST00000439669 LINC01356Q8N9X3 169 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 OR6N2Q8NGY6 317 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 OR5K1Q8NHB7 308 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 DNAJC9Q8WXX5 260 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 SLAMF6Q96DU3 332 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 TIMD4Q96H15 378 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 PLEKHA8Q96JA3 519 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 INTS14Q96SY0 518 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 TEX12Q9BXU0 123 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 PAPOLBQ9NRJ5 636 aaKnown RBP20.38■□□□□ 0.85
CPNE1-217ENST00000439669 CENPMQ9NSP4 180 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 TMEM160Q9NX00 188 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 CDC42EP3Q9UKI2 254 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 MALRD1Q5VYJ5 2156 aa20.38■□□□□ 0.85
CPNE1-217ENST00000439669 SURF4O15260 269 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 IGFBP5P24593 272 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 GSTT1P30711 240 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 CDH15P55291 814 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 CDK5Q00535 292 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 TEX30Q5JUR7 227 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 BHLHE23Q8NDY6 225 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 ZNF582Q96NG8 517 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-217ENST00000439669 SHARPINQ9H0F6 387 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 WIPI2Q9Y4P8 454 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 AP4S1Q9Y587 144 aa20.37■□□□□ 0.85
CPNE1-217ENST00000439669 GLCEO94923 617 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms