RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 TMPRSS13Q9BYE2 586 aa15.88■□□□□ 0.13
CCDC78-204ENST00000439619 TRIM15Q9C019 465 aa15.88■□□□□ 0.13
CCDC78-204ENST00000439619 MUC13Q9H3R2 512 aa15.88■□□□□ 0.13
CCDC78-204ENST00000439619 CDH10Q9Y6N8 788 aa15.88■□□□□ 0.13
CCDC78-204ENST00000439619 SVEP1Q4LDE5 3571 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 F5H5K5 113 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 CPT2P23786 658 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 FPR2P25090 351 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 MDH2P40926 338 aaKnown RBP15.87■□□□□ 0.13
CCDC78-204ENST00000439619 HMGA2P52926 109 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 GYS2P54840 703 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 TPTEP56180 551 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC78-204ENST00000439619 CLEC12AQ5QGZ9 265 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 SLC35F1Q5T1Q4 408 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 SLC18B1Q6NT16 456 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 CYP2R1Q6VVX0 501 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 LRRC28Q86X40 367 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-204ENST00000439619 LINC00346Q8IVM7 164 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 BPIFB2Q8N4F0 458 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 PROKR2Q8NFJ6 384 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 SPTSSAQ969W0 71 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 TMEM100Q9NV29 134 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 CYB5R1Q9UHQ9 305 aa15.87■□□□□ 0.13
CCDC78-204ENST00000439619 OR6C68A6NDL8 312 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 B2RBV5 119 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 TRIM77I1YAP6 450 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 CCNB2O95067 398 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 LCATP04180 440 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 TRAP1Q12931 704 aaKnown RBP15.86■□□□□ 0.13
CCDC78-204ENST00000439619 ESCO2Q56NI9 601 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 SPRNQ5BIV9 151 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 C1orf87Q8N0U7 546 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 OR10AD1Q8NGE0 317 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 OR4C15Q8NGM1 316 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 C1QTNF5Q9BXJ0 243 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 PATZ1Q9HBE1 687 aaKnown RBP15.86■□□□□ 0.13
CCDC78-204ENST00000439619 GCM1Q9NP62 436 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 NOP16Q9Y3C1 178 aaKnown RBP15.86■□□□□ 0.13
CCDC78-204ENST00000439619 LYVE1Q9Y5Y7 322 aa15.86■□□□□ 0.13
CCDC78-204ENST00000439619 IQCF6A8MYZ5 107 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 TMEM178BH3BS89 294 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 VENTXO95231 258 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 IRF2P14316 349 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 ERFP50548 548 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 RAD23AP54725 363 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 ACTG1P63261 375 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 FAM98BQ52LJ0 330 aaKnown RBP15.85■□□□□ 0.13
CCDC78-204ENST00000439619 C12orf54Q6X4T0 127 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 CFAP77Q6ZQR2 320 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 COLCA1Q6ZS62 124 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 C1orf229Q6ZS94 237 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-204ENST00000439619 PGAP1Q75T13 922 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 DHFR2Q86XF0 187 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 BHLHE23Q8NDY6 225 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 SPRYD4Q8WW59 207 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-204ENST00000439619 NSL1Q96IY1 281 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 MEGF10Q96KG7 1140 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 SLC30A2Q9BRI3 323 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 MRI1Q9BV20 369 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 FN3KQ9H479 309 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 MAGIXQ9H6Y5 334 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 EGLN3Q9H6Z9 239 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 REEP1Q9H902 201 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 TBC1D23Q9NUY8 699 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 OR5V1Q9UGF6 321 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 BAIAP2Q9UQB8 552 aa15.85■□□□□ 0.13
CCDC78-204ENST00000439619 AVPP01185 164 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 ACSM4P0C7M7 580 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 ADRA2CP18825 462 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 SLC6A9P48067 706 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 MMP16P51512 607 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 HILS1P60008 231 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 ZMYND11Q15326 602 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 RBMS3Q6XE24 437 aaKnown RBP15.84■□□□□ 0.13
CCDC78-204ENST00000439619 RASSF6Q6ZTQ3 369 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 MRPL21Q7Z2W9 205 aaKnown RBP15.84■□□□□ 0.13
CCDC78-204ENST00000439619 OR9Q2Q8NGE9 314 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 LRGUKQ96M69 825 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 RBM4Q9BWF3 364 aaKnown RBP15.84■□□□□ 0.13
CCDC78-204ENST00000439619 SLC22A4Q9H015 551 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 WDR76Q9H967 626 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 DCAF16Q9NXF7 216 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 IL20Q9NYY1 176 aa15.84■□□□□ 0.13
CCDC78-204ENST00000439619 RGS9O75916 674 aaPredicted RBP15.83■□□□□ 0.12
CCDC78-204ENST00000439619 IFNGP01579 166 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 GGT2P36268 569 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 MAGEA2P43356 314 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 TAF13Q15543 124 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 ARMCX4Q5H9R4 360 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.83■□□□□ 0.12
CCDC78-204ENST00000439619 AQP11Q8NBQ7 271 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 SEMA6DQ8NFY4 1073 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 OR11L1Q8NGX0 322 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 ERGIC1Q969X5 290 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 PLEKHA8Q96JA3 519 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 SIGLEC11Q96RL6 698 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 CCT8L2Q96SF2 557 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 NTN4Q9HB63 628 aa15.83■□□□□ 0.12
CCDC78-204ENST00000439619 MIOXQ9UGB7 285 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms