RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 A0A1B0GVX0 72 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 SERTM2A0A1B0GWG4 89 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 EIF4E2O60573 245 aaKnown RBP2.14□□□□□ -2.07
VPS41-207ENST00000439468 OR5H8P0DN80 308 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 GTF2E2P29084 291 aaKnown RBP2.14□□□□□ -2.07
VPS41-207ENST00000439468 SLC1A1P43005 524 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 EIF3EP60228 445 aaKnown RBP2.14□□□□□ -2.07
VPS41-207ENST00000439468 LIPEQ05469 1076 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 PRPSAP1Q14558 356 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 ZNF726P1Q15940 193 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 TFDP3Q5H9I0 405 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 CEMP1Q6PRD7 247 aaPredicted RBP2.14□□□□□ -2.07
VPS41-207ENST00000439468 C12orf54Q6X4T0 127 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 MBOAT1Q6ZNC8 495 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 FAM92BQ6ZTR7 304 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 ABHD13Q7L211 337 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 HDDC2Q7Z4H3 204 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 C15orf56Q8N910 161 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 OR10G2Q8NGC3 310 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 OR5W2Q8NH69 310 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 OR4S2Q8NH73 311 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 NUBPLQ8TB37 319 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 NRGNQ92686 78 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 EEF1AKMT3Q96AZ1 226 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 TSNARE1Q96NA8 513 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 CHP1Q99653 195 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 PATZ1Q9HBE1 687 aaKnown RBP2.14□□□□□ -2.07
VPS41-207ENST00000439468 AGPAT4Q9NRZ5 378 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 GPATCH2LQ9NWQ4 482 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 HRASLS2Q9NWW9 162 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 ZNF222Q9UK12 451 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 TROQ12816 1431 aaPredicted RBP2.14□□□□□ -2.07
VPS41-207ENST00000439468 SPATA31E1Q6ZUB1 1445 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 PIKFYVEQ9Y2I7 2098 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 HTTP42858 3142 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 PHLPP2Q6ZVD8 1323 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 LY75O60449 1722 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 TOGARAM1Q9Y4F4 1720 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 FYCO1Q9BQS8 1478 aa2.14□□□□□ -2.07
VPS41-207ENST00000439468 TRPM1Q7Z4N2 1603 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 PIK3R4Q99570 1358 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 DICER1Q9UPY3 1922 aaKnown RBP2.13□□□□□ -2.07
VPS41-207ENST00000439468 LMO7Q8WWI1 1683 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CACNA1GO43497 2377 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 PIEZO1Q92508 2521 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 IGHV5-51A0A0C4DH38 117 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 SIRPB1O00241 398 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CHST1O43916 411 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 KLHL41O60662 606 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 SPAG7O75391 227 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CLDN11O75508 207 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 OR2F2O95006 317 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 RAB3DO95716 219 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 AGTP01019 485 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 EIF4EP06730 217 aaKnown RBP2.13□□□□□ -2.07
VPS41-207ENST00000439468 TPM2P07951 284 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 PGAM1P18669 254 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 BCKDHBP21953 392 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CEACAM3P40198 252 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 UQCRFS1P47985 274 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CSNK1A1P48729 337 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CSNK1EP49674 416 aaKnown RBP2.13□□□□□ -2.07
VPS41-207ENST00000439468 RGS8P57771 180 aaPredicted RBP2.13□□□□□ -2.07
VPS41-207ENST00000439468 ADARB1P78563 741 aaKnown RBP2.13□□□□□ -2.07
VPS41-207ENST00000439468 EBI3Q14213 229 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 STK11Q15831 433 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 FAM83EQ2M2I3 478 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 LINC00483Q53H64 154 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 ARL9Q6T311 187 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 FBXW12Q6X9E4 464 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CERS6Q6ZMG9 384 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 H2AFVQ71UI9 128 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 LUZP2Q86TE4 346 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 OFCC1Q8IZS5 231 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 IQCKQ8N0W5 287 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 PGAM4Q8N0Y7 254 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 LYPD6BQ8NI32 183 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 LRRC29Q8WV35 223 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CREB3L1Q96BA8 519 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 RBMXL1Q96E39 390 aaKnown RBP2.13□□□□□ -2.07
VPS41-207ENST00000439468 OR2A5Q96R48 311 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 C12orf10Q9HB07 376 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 ZDHHC4Q9NPG8 344 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 LHX9Q9NQ69 397 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 LGALS13Q9UHV8 139 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 RAB26Q9ULW5 256 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 SLC17A4Q9Y2C5 497 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CDC42BPGQ6DT37 1551 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 USP34Q70CQ2 3546 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CLTCL1P53675 1640 aa2.13□□□□□ -2.07
VPS41-207ENST00000439468 CEP290O15078 2479 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 TRPM7Q96QT4 1865 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 OVOS2A0A0G2JMS6 1433 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 OVOS2A0A0J9YW53 1432 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 ARHGAP31Q2M1Z3 1444 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 OVOS2Q6IE36 1432 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 IGHV3-66A0A0C4DH42 116 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 SMKR1H3BMG3 65 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 L7N2F9 121 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 CD160O95971 181 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms