RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ECH1Q13011 328 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 RBMS3Q6XE24 437 aaKnown RBP15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 LINC00346Q8IVM7 164 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 ZDHHC21Q8IVQ6 265 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 SDR9C7Q8NEX9 313 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 SLC26A10Q8NG04 563 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 OR52L1Q8NGH7 329 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 FAM216AQ8WUB2 273 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 MEGF10Q96KG7 1140 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 ATF6BQ99941 703 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 GCM1Q9NP62 436 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 OR5V1Q9UGF6 321 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 OPN4Q9UHM6 478 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 WNK2Q9Y3S1 2297 aa15.54■□□□□ 0.08
AC004540.1-201ENST00000439120 LRRC30A6NM36 301 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 F5H5K5 113 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 TMEM178BH3BS89 294 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 DCTN3O75935 186 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 RBMXP38159 391 aaKnown RBP15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 SLC6A9P48067 706 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 TSPAN31Q12999 210 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 MALLQ13021 153 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 SLC35F1Q5T1Q4 408 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 CFAP77Q6ZQR2 320 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 OR52E2Q8NGJ4 325 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 C22orf15Q8WYQ4 148 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 POP5Q969H6 163 aaKnown RBP15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 SIGLEC11Q96RL6 698 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 MRI1Q9BV20 369 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 FN3KQ9H479 309 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 WDR76Q9H967 626 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 NTN4Q9HB63 628 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 IL1RAPQ9NPH3 570 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 CD300AQ9UGN4 299 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 ARL2BPQ9Y2Y0 163 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 AUP1Q9Y679 476 aa15.53■□□□□ 0.08
AC004540.1-201ENST00000439120 IQCF6A8MYZ5 107 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 LCATP04180 440 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 ZNF823P16415 610 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 GSSP48637 474 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 SEC61A1P61619 476 aaKnown RBP15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 SPATS1Q496A3 300 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 CLEC12AQ5QGZ9 265 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 SLC18B1Q6NT16 456 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 RPL13AP3Q6NVV1 102 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 ZNF620Q6ZNG0 422 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 ZBTB46Q86UZ6 589 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 DEFB107AQ8IZN7 70 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 C1orf87Q8N0U7 546 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 ZNF420Q8TAQ5 688 aaPredicted RBP15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 SLC30A2Q9BRI3 323 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 MMP26Q9NRE1 261 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 TMEM100Q9NV29 134 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 ARL8BQ9NVJ2 186 aa15.52■□□□□ 0.08
AC004540.1-201ENST00000439120 ARHGAP32A7KAX9 2087 aa15.52■□□□□ 0.07
AC004540.1-201ENST00000439120 IGHV3-64DA0A0J9YX35 117 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 OR6C68A6NDL8 312 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 F5H5P2 479 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 H0YL77 283 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 KRT36O76013 467 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 CYB5R3P00387 301 aaPredicted RBP15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 ACSM4P0C7M7 580 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 IRF2P14316 349 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 RPS2P15880 293 aaKnown RBP15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 CFPP27918 469 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 TPTEP56180 551 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 GNGT1P63211 74 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 TRAP1Q12931 704 aaKnown RBP15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 ZNF154Q13106 437 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 PGBD2Q6P3X8 592 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 MOGAT3Q86VF5 341 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 LINC00471Q8N535 108 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 C3orf56Q8N813 242 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 DEFB108BQ8NET1 73 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 PROKR2Q8NFJ6 384 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 C1QTNF5Q9BXJ0 243 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 EGLN3Q9H6Z9 239 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 DDX28Q9NUL7 540 aaKnown RBP15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 KCNG2Q9UJ96 466 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 LRCH1Q9Y2L9 728 aa15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 POLR3KQ9Y2Y1 108 aaPredicted RBP15.51■□□□□ 0.07
AC004540.1-201ENST00000439120 CEACAM18A8MTB9 384 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 F5H0A9 414 aaPredicted RBP15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 TRAPPC2LH3BP13 241 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 ZNF205O95201 554 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 FSHBP01225 129 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 ZNF12P17014 697 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 MNAT1P51948 309 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 RAD23AP54725 363 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 DBPQ10586 325 aaPredicted RBP15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 CYP2R1Q6VVX0 501 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 PGAP1Q75T13 922 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 MRPL21Q7Z2W9 205 aaKnown RBP15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 SPRYD4Q8WW59 207 aaPredicted RBP15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 SPTSSAQ969W0 71 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 SSBP3Q9BWW4 388 aaPredicted RBP15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 CYB5R1Q9UHQ9 305 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 NUP50Q9UKX7 468 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 INSIG2Q9Y5U4 225 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms