RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LTBP4Q8N2S1 1624 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 A0A0A6YYD5 115 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 PRAMEF26H0Y7S4 382 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF25P17030 456 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 HRH1P35367 487 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 NPY4RP50391 375 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 PKIAP61925 76 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 GPM6BQ13491 265 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 KDM8Q8N371 416 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SNIP1Q8TAD8 396 aaKnown RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 LMX1AQ8TE12 382 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 EDAQ92838 391 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DTD2Q96FN9 168 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 OR5B12Q96R08 314 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 C19orf43Q9BQ61 176 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 LIN7CQ9NUP9 197 aaKnown RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DKKL1Q9UK85 242 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 HEBP2Q9Y5Z4 205 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DOCK8Q8NF50 2099 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF860A6NHJ4 632 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ATXN7O15265 892 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 NDUFB2O95178 105 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 HEXBP07686 556 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ADRB3P13945 408 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF20P17024 532 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 NKX6-1P78426 367 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 RELQ04864 619 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ABCA11PQ4W5N1 156 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM64Q6YI46 380 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SLC24A5Q71RS6 500 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 LRP11Q86VZ4 500 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF547Q8IVP9 402 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TMEFF1Q8IYR6 380 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 COX18Q8N8Q8 333 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 OR1J1Q8NGS3 322 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF417Q8TAU3 575 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 WFIKKN2Q8TEU8 576 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ASB13Q8WXK3 278 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 RBM18Q96H35 190 aaKnown RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SMIM8Q96KF7 97 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 MRI1Q9BV20 369 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SLC17A9Q9BYT1 436 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 UCK1Q9HA47 277 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 LAMP5Q9UJQ1 280 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 LOC100289279A0A1B0GTE1 492 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TACSTD2P09758 323 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SLC35G6P0C7Q6 338 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 HSD11B1P28845 292 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DRAM2Q6UX65 266 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 RTN4RL2Q86UN3 420 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SLC25A42Q86VD7 318 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF679Q8IYX0 411 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM229BQ8NBD8 167 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SLC41A2Q96JW4 573 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TAAR9Q96RI9 348 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 NEU1Q99519 415 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 C9J4A7 227 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 EIF1AYO14602 144 aaKnown RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 EREGO14944 169 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TGM5O43548 720 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TBX19O60806 448 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 RAMP1O60894 148 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TRGC2P03986 189 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 EIF1AXP47813 144 aaKnown RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 RPS23P62266 143 aaKnown RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 CSNK1G2P78368 415 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ASTLQ6HA08 431 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 OR2T2Q6IF00 324 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TRAPPC6BQ86SZ2 158 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 SAT2Q96F10 170 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 CAPNS2Q96L46 248 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DGAT2Q96PD7 388 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 CITED2Q99967 270 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TEX101Q9BY14 249 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 MARCH5Q9NX47 278 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 FLRT3Q9NZU0 649 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 A0A087WZY1 265 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DUXAA6NLW8 204 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 EFSO43281 561 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 F13BP05160 661 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DHCR24Q15392 516 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 C2orf27AQ580R0 203 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 BTNL8Q6UX41 500 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 RNF113BQ8IZP6 322 aaKnown RBP6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF610Q8N9Z0 462 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 OR51A2Q8NGJ7 313 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 ABHD5Q8WTS1 349 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 CYYR1Q96J86 154 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 PTGES2Q9H7Z7 377 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 MPDZO75970 2070 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 DENND4CQ5VZ89 1909 aa6.72□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM189-UBE2V1I3L0A0 370 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 TLX3O43711 291 aaPredicted RBP6.71□□□□□ -1.33
CPSF6-202ENST00000435070 CTSAP10619 480 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 GDI1P31150 447 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 NAAAQ02083 359 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 RASGEF1BQ0VAM2 473 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms