RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 H2BFSP57053 126 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 INPP5JQ15735 1006 aaPredicted RBP16.52■□□□□ 0.23
CLK1-205ENST00000434813 MPPED2Q15777 294 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 ZNF239Q16600 458 aaKnown RBP16.52■□□□□ 0.23
CLK1-205ENST00000434813 CLPPQ16740 277 aaPredicted RBP16.52■□□□□ 0.23
CLK1-205ENST00000434813 OR10K2Q6IF99 312 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 RAB12Q6IQ22 244 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 GALNT16Q8N428 558 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 ELP5Q8TE02 316 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 ASB13Q8WXK3 278 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 MARVELD3Q96A59 401 aa16.52■□□□□ 0.23
CLK1-205ENST00000434813 SLC25A21Q9BQT8 299 aaPredicted RBP16.52■□□□□ 0.23
CLK1-205ENST00000434813 L7N2F9 121 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 CYB5AP00167 134 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 CFAP77Q6ZQR2 320 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 OR1M1Q8NGA1 313 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 CCDC107Q8WV48 283 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 AQP3Q92482 292 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 ADAT3Q96EY9 351 aaPredicted RBP16.51■□□□□ 0.23
CLK1-205ENST00000434813 WDR89Q96FK6 387 aaPredicted RBP16.51■□□□□ 0.23
CLK1-205ENST00000434813 OR5B2Q96R09 309 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 UQCC2Q9BRT2 126 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 CNTD2Q9H8S5 307 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 WDR54Q9H977 334 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 TMEM138Q9NPI0 162 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 OCIAD1Q9NX40 245 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 KLK13Q9UKR3 277 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 RAB22AQ9UL26 194 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 RALGAPA1Q6GYQ0 2036 aa16.51■□□□□ 0.23
CLK1-205ENST00000434813 A0A1W2PNR3 127 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 METTL21EPA6NDL7 271 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 OR6C65A6NJZ3 312 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 ZNF878C9JN71 531 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 F5H5P2 479 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 GOSR2O14653 212 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 BPNT1O95861 308 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 FGF5P12034 268 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 NFYAP23511 347 aaPredicted RBP16.5■□□□□ 0.23
CLK1-205ENST00000434813 ADH6P28332 368 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 EIF1P41567 113 aaKnown RBP16.5■□□□□ 0.23
CLK1-205ENST00000434813 CLDN6P56747 220 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 POU4F3Q15319 338 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 C2orf68Q2NKX9 166 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 PHF19Q5T6S3 580 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 ZNF529Q6P280 563 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 SLC23A3Q6PIS1 610 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 IDO2Q6ZQW0 420 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 RHOUQ7L0Q8 258 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 SLC22A24Q8N4F4 322 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 WDSUB1Q8N9V3 476 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 OR4K17Q8NGC6 315 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 OR6X1Q8NH79 312 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 IFI44Q8TCB0 444 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 TNFAIP8L1Q8WVP5 186 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 MYOZ1Q9NP98 299 aaPredicted RBP16.5■□□□□ 0.23
CLK1-205ENST00000434813 NXT1Q9UKK6 140 aaKnown RBP16.5■□□□□ 0.23
CLK1-205ENST00000434813 DMDP11532 3685 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 TMEM82A0PJX8 343 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 HMSDA8MTL9 139 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 MCRIP1C9JLW8 97 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 PMS2P2O95744 297 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 ZNF735P0CB33 412 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 ZNF35P13682 527 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 GNALP38405 381 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 PCOLCEQ15113 449 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 C4orf46Q504U0 113 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 SLC25A47Q6Q0C1 308 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 OR52N4Q8NGI2 321 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 OR1J2Q8NGS2 313 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 OXGR1Q96P68 337 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 TINAGL1Q9GZM7 467 aaPredicted RBP16.5■□□□□ 0.23
CLK1-205ENST00000434813 POFUT1Q9H488 388 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 PTGES2Q9H7Z7 377 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 POLR1DQ9Y2S0 133 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 HDGFL3Q9Y3E1 203 aa16.5■□□□□ 0.23
CLK1-205ENST00000434813 CHCHD2Q9Y6H1 151 aaPredicted RBP16.5■□□□□ 0.23
CLK1-205ENST00000434813 LOC102723996A0A087X1L8 192 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 TMEM235A6NFC5 223 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 TUBAL3A6NHL2 446 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 ZNF736B4DX44 427 aaPredicted RBP16.49■□□□□ 0.23
CLK1-205ENST00000434813 ZNF814B7Z6K7 855 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 H3BUI4 141 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 M0QYG6 137 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 RAB27BO00194 218 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 AMY2AP04746 511 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 FKBP2P26885 142 aaKnown RBP16.49■□□□□ 0.23
CLK1-205ENST00000434813 UBE2MP61081 183 aaKnown RBP16.49■□□□□ 0.23
CLK1-205ENST00000434813 SEC61A1P61619 476 aaKnown RBP16.49■□□□□ 0.23
CLK1-205ENST00000434813 QRFPP83859 136 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 FOXK1P85037 733 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 LPAL2Q16609 132 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 TOR2AQ5JU69 321 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 GPAT4Q86UL3 456 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 ACBD4Q8NC06 268 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 FAM46BQ96A09 425 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 CHST6Q9GZX3 395 aa16.49■□□□□ 0.23
CLK1-205ENST00000434813 ZMAT3Q9HA38 289 aaKnown RBP16.49■□□□□ 0.23
CLK1-205ENST00000434813 MYEF2Q9P2K5 600 aaKnown RBP16.49■□□□□ 0.23
CLK1-205ENST00000434813 A0A1B0GTI1 187 aa16.48■□□□□ 0.23
CLK1-205ENST00000434813 TP53I11O14683 189 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms