RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 LCATP04180 440 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 HMGN1P05114 100 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ERCC1P07992 297 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 COX5BP10606 129 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 FCGR1AP12314 374 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 DAOP14920 347 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 FOSL1P15407 271 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZNF250P15622 560 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZNF3P17036 446 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CR1P17927 2039 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 PCSK6P29122 969 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 EPHA2P29317 976 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 POLR2IP36954 125 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 EVX1P49640 407 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ENTPD1P49961 510 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 PPOXP50336 477 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 PDLIM4P50479 330 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 PRKXP51817 358 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLC25A1P53007 311 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 HIST1H3AP68431 136 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CCL8P80075 99 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 AKAP6Q13023 2319 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 PSG7Q13046 419 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 HNRNPA0Q13151 305 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 EIF2B1Q14232 305 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 GGTLC2Q14390 218 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 TAF13Q15543 124 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZIK1Q3SY52 487 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 TMEM255AQ5JRV8 349 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 HIST2H3PS2Q5TEC6 136 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLC18B1Q6NT16 456 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 FAHD1Q6P587 224 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CLEC9AQ6UXN8 241 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 UNQ6126/PRO20091Q6UXV3 157 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 HIST2H3AQ71DI3 136 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CXXC5Q7LFL8 322 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 DCXRQ7Z4W1 244 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 BCDIN3DQ7Z5W3 292 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ERI1Q8IV48 349 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 OR5AS1Q8N127 324 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 BBS1Q8NFJ9 593 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 KLF14Q8TD94 323 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 C10orf105Q8TEF2 133 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 THEM6Q8WUY1 208 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 SNX33Q8WV41 574 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 NEU4Q8WWR8 484 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZMYND19Q96E35 227 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CENPNQ96H22 339 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 MAP6Q96JE9 813 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 RAB3IPQ96QF0 476 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 SNX18Q96RF0 628 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ATF6BQ99941 703 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 WACQ9BTA9 647 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 TEX12Q9BXU0 123 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 NMNAT2Q9BZQ4 307 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 RIBC2Q9H4K1 309 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 MSL2Q9HCI7 577 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 HINT3Q9NQE9 182 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 DLL4Q9NR61 685 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CMC2Q9NRP2 79 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 DECR2Q9NUI1 292 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLCO1C1Q9NYB5 712 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 H2AFY2Q9P0M6 372 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 UNC79Q9P2D8 2635 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CYB5R1Q9UHQ9 305 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 GPR160Q9UJ42 338 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 OAZ3Q9UMX2 235 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ITPR2Q14571 2701 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 YLPM1P49750 1951 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ANKRD17O75179 2603 aaKnown RBP4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 HRNRQ86YZ3 2850 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 IGLV3-9A0A075B6K5 115 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 IGHV3-64DA0A0J9YX35 117 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 LOC390937A0A1W2PQ73 354 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 PLSCR5A0PG75 271 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 LRP5LA4QPB2 252 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 OR6C6A6NF89 314 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLC22A31A6NKX4 558 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 C17orf100A8MU93 164 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 H3BNX3 289 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 TLX2O43763 284 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 PRKYO43930 277 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 TIMM8AO60220 97 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 SELENOFO60613 162 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 GLCEO94923 617 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 IGLV1-40P01703 118 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 IGHV1-46P01743 117 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 MRPL3P09001 348 aaKnown RBP4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLC2A1P11166 492 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 PAICSP22234 425 aaKnown RBP4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 NAA10P41227 235 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLC6A9P48067 706 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZNF81P51508 661 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 TPTEP56180 551 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 DSCR9P59020 149 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 APOFQ13790 326 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 MOGQ16653 247 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 SPRNQ5BIV9 151 aa4.92□□□□□ -1.62
HMGB3P24-201ENST00000433260 LINC01590Q5TEZ4 76 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms