RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SLA2Q9H6Q3 261 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 EMC7Q9NPA0 242 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 TAS2R4Q9NYW5 299 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 KLK11Q9UBX7 282 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 MTFP1Q9UDX5 166 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 GDF2Q9UK05 429 aaPredicted RBP11.38□□□□□ -0.59
DDX56-204ENST00000431640 ING4Q9UNL4 249 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 FREM3P0C091 2139 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 LOC390937A0A1W2PQ73 354 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 OR2M5A3KFT3 312 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 P2RY10O00398 339 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 EIF1AYO14602 144 aaKnown RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 PEX14O75381 377 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 WNT11O96014 354 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 SDHBP21912 280 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 SRD5A2P31213 254 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 OTX2P32243 289 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 PRSS3P35030 304 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 CLDN17P56750 224 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 IFITM2Q01629 132 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 TNK1Q13470 666 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 GLYATL3Q5SZD4 288 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 SFRP4Q6FHJ7 346 aaPredicted RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 ASPHD2Q6ICH7 369 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 MTFR2Q6P444 385 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 ITFG2Q969R8 447 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 PNPLA2Q96AD5 504 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 MED30Q96HR3 178 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 JSRP1Q96MG2 331 aaPredicted RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 SF3B5Q9BWJ5 86 aaKnown RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 BEX2Q9BXY8 128 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 ATG5Q9H1Y0 275 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 GLTPQ9NZD2 209 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 PTTG3PQ9NZH4 202 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 MRPS18CQ9Y3D5 142 aaKnown RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 LHFPL6Q9Y693 200 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 TRAV18A0A075B6X5 111 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 TMEM272A0A1B0GTI8 110 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 A0A1B0GVI7 797 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 ZNF814B7Z6K7 855 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 NPIPA2E9PIF3 369 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 NPIPA3F8WFD2 350 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 SYT7O43581 403 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 TGM6O95932 706 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 TTRP02766 147 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 SERPINA7P05543 415 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 ERCC1P07992 297 aaPredicted RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 ACSM4P0C7M7 580 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 GABRA1P14867 456 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 RAB6AP20340 208 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 BDKRB2P30411 391 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 DLSTP36957 453 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 CSNK1A1P48729 337 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 ZNF133P52736 654 aaPredicted RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 GRB2P62993 217 aaKnown RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 SF3B4Q15427 424 aaKnown RBP eCLIP11.37□□□□□ -0.594e-8■■■■□ 26.5
DDX56-204ENST00000431640 BCL2A1Q16548 175 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 C10orf128Q5T292 105 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 CARD17Q5XLA6 110 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 CREB3L2Q70SY1 520 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 VASH2Q86V25 355 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 CDH26Q8IXH8 852 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 ASCC1Q8N9N2 400 aaKnown RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 PLPP7Q8NBV4 271 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 OR6N1Q8NGY5 312 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 ZFAND1Q8TCF1 268 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 TMEM54Q969K7 222 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 C20orf85Q9H1P6 137 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 SLCO5A1Q9H2Y9 848 aa11.37□□□□□ -0.59
DDX56-204ENST00000431640 RANBP3Q9H6Z4 567 aaPredicted RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 PAQR5Q9NXK6 330 aaPredicted RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 MRPL15Q9P015 296 aaKnown RBP11.37□□□□□ -0.59
DDX56-204ENST00000431640 ALPK2Q86TB3 2170 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 LOC400499M0QZD8 3231 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 CIB4A0PJX0 185 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 METTL21EPA6NDL7 271 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 GMDSO60547 372 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 CTSSP25774 331 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 EIF1AXP47813 144 aaKnown RBP11.36□□□□□ -0.59
DDX56-204ENST00000431640 PSMA6P60900 246 aaKnown RBP11.36□□□□□ -0.59
DDX56-204ENST00000431640 FCN2Q15485 313 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 METTL11BQ5VVY1 283 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 SLC25A25Q6KCM7 469 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 ADGRE4PQ86SQ3 457 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 JAGN1Q8N5M9 183 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 OR10S1Q8NGN2 331 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 ADAMTS17Q8TE56 1095 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 FGGYQ96C11 551 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 UQCC2Q9BRT2 126 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 UTP23Q9BRU9 249 aaKnown RBP11.36□□□□□ -0.59
DDX56-204ENST00000431640 GON7Q9BXV9 100 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 GPR87Q9BY21 358 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 SCPEP1Q9HB40 452 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 TMEM138Q9NPI0 162 aa11.36□□□□□ -0.59
DDX56-204ENST00000431640 LAMA5O15230 3695 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 SCGNO76038 276 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 TMIGD3P0DMS9 266 aaPredicted RBP11.35□□□□□ -0.59
DDX56-204ENST00000431640 LIPCP11150 499 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 ANXA3P12429 323 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 RAB3AP20336 220 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms