RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 SAMD4BQ5PRF9 694 aaKnown RBP17.5■□□□□ 0.39
UBXN4-204ENST00000426921 SLC18B1Q6NT16 456 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 CORO6Q6QEF8 472 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 ZDHHC22Q8N966 263 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 OR10AD1Q8NGE0 317 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 ZNF582Q96NG8 517 aaPredicted RBP17.5■□□□□ 0.39
UBXN4-204ENST00000426921 INSIG2Q9Y5U4 225 aa17.5■□□□□ 0.39
UBXN4-204ENST00000426921 CEACAM18A8MTB9 384 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 ARPC2O15144 300 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 ATP8B1O43520 1251 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 IDH3BO43837 385 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 OR10H3O60404 316 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 FPR2P25090 351 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 IFNGR2P38484 337 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 CENPAP49450 140 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 ZNF620Q6ZNG0 422 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 CFAP77Q6ZQR2 320 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.49■□□□□ 0.39
UBXN4-204ENST00000426921 ATG16L2Q8NAA4 619 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 OR4K13Q8NH42 304 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 MCUR1Q96AQ8 359 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 NSMCE2Q96MF7 247 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 IFT27Q9BW83 186 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 NSRP1Q9H0G5 558 aaKnown RBP17.49■□□□□ 0.39
UBXN4-204ENST00000426921 NTN4Q9HB63 628 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 SRA1Q9HD15 236 aaKnown RBP17.49■□□□□ 0.39
UBXN4-204ENST00000426921 IL1RAPQ9NPH3 570 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 PNRC2Q9NPJ4 139 aaKnown RBP17.49■□□□□ 0.39
UBXN4-204ENST00000426921 RPRD1BQ9NQG5 326 aaKnown RBP17.49■□□□□ 0.39
UBXN4-204ENST00000426921 CYB5R1Q9UHQ9 305 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 LRCH1Q9Y2L9 728 aa17.49■□□□□ 0.39
UBXN4-204ENST00000426921 OR6C68A6NDL8 312 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 FABP3P05413 133 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 ACSM4P0C7M7 580 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 SELEP16581 610 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 RRM2P31350 389 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 GGT2P36268 569 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 SRP9P49458 86 aaKnown RBP17.48■□□□□ 0.39
UBXN4-204ENST00000426921 TSPAN31Q12999 210 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 ECH1Q13011 328 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 SLC36A3Q495N2 470 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 SPATS1Q496A3 300 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 ESCO2Q56NI9 601 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 GCDHQ92947 438 aaPredicted RBP17.48■□□□□ 0.39
UBXN4-204ENST00000426921 ATF6BQ99941 703 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 FAM107BQ9H098 131 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 AUP1Q9Y679 476 aa17.48■□□□□ 0.39
UBXN4-204ENST00000426921 H0YL77 283 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 WNT2P09544 360 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 GATA4P43694 442 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 UBA52P62987 128 aaKnown RBP17.47■□□□□ 0.39
UBXN4-204ENST00000426921 PAX2Q02962 417 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 DBPQ10586 325 aaPredicted RBP17.47■□□□□ 0.39
UBXN4-204ENST00000426921 ARMCX4Q5H9R4 360 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 KLF17Q5JT82 389 aaPredicted RBP17.47■□□□□ 0.39
UBXN4-204ENST00000426921 PGBD2Q6P3X8 592 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 SDR9C7Q8NEX9 313 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 ZNF420Q8TAQ5 688 aaPredicted RBP17.47■□□□□ 0.39
UBXN4-204ENST00000426921 ZMYND19Q96E35 227 aaPredicted RBP17.47■□□□□ 0.39
UBXN4-204ENST00000426921 OR5V1Q9UGF6 321 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 KCNG2Q9UJ96 466 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 NUP50Q9UKX7 468 aa17.47■□□□□ 0.39
UBXN4-204ENST00000426921 NOS3P29474 1203 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 GK2Q14410 553 aaPredicted RBP17.46■□□□□ 0.39
UBXN4-204ENST00000426921 DOK3Q7L591 496 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 LINC00346Q8IVM7 164 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 BHLHE23Q8NDY6 225 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 GNPDA2Q8TDQ7 276 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 C22orf15Q8WYQ4 148 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 DACT3Q96B18 629 aaPredicted RBP17.46■□□□□ 0.39
UBXN4-204ENST00000426921 CDRT15Q96T59 188 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 PITX2Q99697 317 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 HCAR1Q9BXC0 346 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 TMEM165Q9HC07 324 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 MRPL22Q9NWU5 206 aaKnown RBP17.46■□□□□ 0.39
UBXN4-204ENST00000426921 TMCC3Q9ULS5 477 aa17.46■□□□□ 0.39
UBXN4-204ENST00000426921 F5H5P2 479 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 PPIAL4GP0DN37 164 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 MSX2P35548 267 aaPredicted RBP17.45■□□□□ 0.38
UBXN4-204ENST00000426921 HMGA2P52926 109 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 PAX8Q06710 450 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 TRAP1Q12931 704 aaKnown RBP17.45■□□□□ 0.38
UBXN4-204ENST00000426921 RPL13AP3Q6NVV1 102 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 ZDHHC21Q8IVQ6 265 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 CELF2-AS1Q8N7Q2 184 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 OR2AJ1Q8NGZ0 328 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 DDOQ99489 341 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 MRI1Q9BV20 369 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 SSBP3Q9BWW4 388 aaPredicted RBP17.45■□□□□ 0.38
UBXN4-204ENST00000426921 PLA2G12AQ9BZM1 189 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 FN3KQ9H479 309 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 WDR76Q9H967 626 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 TMEM100Q9NV29 134 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 TAGLN3Q9UI15 199 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 CDH10Q9Y6N8 788 aa17.45■□□□□ 0.38
UBXN4-204ENST00000426921 LRRC30A6NM36 301 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 F5H5K5 113 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 BHLHE40O14503 412 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 KRT36O76013 467 aa17.44■□□□□ 0.38
UBXN4-204ENST00000426921 CYB5R3P00387 301 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms