RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 GIPP09681 153 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF28-203ENST00000426542 OR10A3P58181 314 aa16.31■□□□□ 0.2
ARHGEF28-203ENST00000426542 ST8SIA1Q92185 356 aa16.31■□□□□ 0.2
ARHGEF28-203ENST00000426542 OR2A14Q96R47 310 aa16.31■□□□□ 0.2
ARHGEF28-203ENST00000426542 LYSMD1Q96S90 227 aa16.31■□□□□ 0.2
ARHGEF28-203ENST00000426542 SOX7Q9BT81 388 aa16.31■□□□□ 0.2
ARHGEF28-203ENST00000426542 DTYMKP23919 212 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 HAGHQ16775 308 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 ANKRD33Q7Z3H0 272 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 SIAEQ9HAT2 523 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 SEC14L6B5MCN3 397 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 OPRM1P35372 400 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 SARAFQ96BY9 339 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 R4GMQ9 66 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 PDGFAP04085 211 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 IAPPP10997 89 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 BSGP35613 385 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 RPS27P42677 84 aaKnown RBP16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 FAAP20Q6NZ36 180 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 XRCC2O43543 280 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 CRYAAP02489 173 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 OR5G3P0C626 314 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 ZGLP1P0C6A0 271 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 RPS16P62249 146 aaKnown RBP16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 ALKBH6Q3KRA9 238 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 DEFB123Q8N688 67 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 ZFP62Q8NB50 900 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 MRPS24Q96EL2 167 aaKnown RBP16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 IP6K3Q96PC2 410 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 MED18Q9BUE0 208 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 SLC31A2O15432 143 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 CT45A10P0DMU9 189 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 CLN3Q13286 438 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 CAMKMTQ7Z624 323 aa16.3■□□□□ 0.2
ARHGEF28-203ENST00000426542 INSM1Q01101 510 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 ZNF718Q3SXZ3 478 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 NECAP1Q8NC96 275 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 ATF6BQ99941 703 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 FBXL4Q9UKA2 621 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 A0A0B4J203 849 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 PPP1R2P9O14990 202 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 SMAD4Q13485 552 aaKnown RBP16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 TAF9Q16594 264 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 ZDHHC23Q8IYP9 409 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 CORO2AQ92828 525 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 A3GALT2U3KPV4 340 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 A0A087WZY1 265 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 UPK1AO00322 258 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 SMIM18P0DKX4 95 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 PCK2Q16822 640 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 PLAC9Q5JTB6 97 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 OR4F5Q8NH21 305 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 OR4F4Q96R69 305 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 QPCTLQ9NXS2 382 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 A0A0A6YYJ9 748 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 HRO43593 1189 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 MYBPHQ13203 477 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 TMEM268Q5VZI3 342 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 BCL7CQ8WUZ0 217 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 NUDT9Q9BW91 350 aa16.29■□□□□ 0.2
ARHGEF28-203ENST00000426542 TAAR5O14804 337 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 FCGR2CP31995 323 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 FABP6P51161 128 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 GFERP55789 205 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 SHBQ15464 509 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 ARRDC1-AS1Q9H2J1 176 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 SLC22A13Q9Y226 551 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 A0A087WV62 115 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 MPPED2Q15777 294 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 CMTM4Q8IZR5 234 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 EXD3Q8N9H8 876 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 PIGMQ9H3S5 423 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 LIN7CQ9NUP9 197 aaKnown RBP16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 KPTNQ9Y664 436 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 OR2C1O95371 312 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 LCN15Q6UWW0 184 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 TMEM123Q8N131 208 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 TXNIPQ9H3M7 391 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 COL16A1Q07092 1604 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 TMEM265A0A087WTH1 108 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 AQP7P3A6NL99 342 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 FUCA1P04066 466 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 CTSLP07711 333 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 UBE2MP61081 183 aaKnown RBP16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 SNRPNP63162 240 aaKnown RBP16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 OTUD1Q5VV17 481 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 ANKRD34AQ69YU3 496 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 H3F3CQ6NXT2 135 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 LSRQ86X29 649 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 ADGRG3Q86Y34 549 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 OR5B3Q8NH48 314 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 ROBO4Q8WZ75 1007 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 FRG2CA6NGY1 282 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 CHEK1O14757 476 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 IGLV3-27P01718 113 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 SRFP11831 508 aa16.28■□□□□ 0.2
ARHGEF28-203ENST00000426542 HAAOP46952 286 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms