RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MYLPFQ96A32 169 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 SLC25A36Q96CQ1 311 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 ASB9Q96DX5 294 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 MRPS24Q96EL2 167 aaKnown RBP2.41□□□□□ -2.02
LINC01040-201ENST00000425048 NSMCE2Q96MF7 247 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 RILPQ96NA2 401 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 CCNL2Q96S94 520 aaPredicted RBP2.41□□□□□ -2.02
LINC01040-201ENST00000425048 CPXM1Q96SM3 734 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 HBEGFQ99075 208 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 KLF6Q99612 283 aaPredicted RBP2.41□□□□□ -2.02
LINC01040-201ENST00000425048 NPAS2Q99743 824 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 APOL4Q9BPW4 351 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 CMSS1Q9BQ75 279 aaKnown RBP2.41□□□□□ -2.02
LINC01040-201ENST00000425048 GPR174Q9BXC1 333 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 UGT2B28Q9BY64 529 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 POTEKPQ9BYX7 375 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 DCSTAMPQ9H295 470 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 ASCL3Q9NQ33 180 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 AGPAT4Q9NRZ5 378 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 CENPMQ9NSP4 180 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 C14orf105Q9NVL8 296 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 ELOVL2Q9NXB9 296 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 SLCO1C1Q9NYB5 712 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 RDH8Q9NYR8 311 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 TECRQ9NZ01 308 aaKnown RBP2.41□□□□□ -2.02
LINC01040-201ENST00000425048 WARS2Q9UGM6 360 aaKnown RBP2.41□□□□□ -2.02
LINC01040-201ENST00000425048 LEF1Q9UJU2 399 aaPredicted RBP2.41□□□□□ -2.02
LINC01040-201ENST00000425048 SSR3Q9UNL2 185 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 GPR132Q9UNW8 380 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 NUBP2Q9Y5Y2 271 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 ALG6Q9Y672 507 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 ALG5Q9Y673 324 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 NHSL1Q5SYE7 1610 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 CACNA1SQ13698 1873 aa2.41□□□□□ -2.02
LINC01040-201ENST00000425048 QSER1Q2KHR3 1735 aa2.4□□□□□ -2.02
LINC01040-201ENST00000425048 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.4□□□□□ -2.02
LINC01040-201ENST00000425048 BTBD17A6NE02 478 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 CLDN24A6NM45 220 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 WASHC1A8K0Z3 465 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 WASH3PC4AMC7 463 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 E7ESA3 106 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 G3V2T6 193 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 H0YIV9 168 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 LGALS8O00214 317 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 CYB561D2O14569 222 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 AIM2O14862 343 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 CASC3O15234 703 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 ADAM12O43184 909 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 PPIHO43447 177 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 CHMP2AO43633 222 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 PRKYO43930 277 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 STX11O75558 287 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RAD51DO75771 328 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 GATBO75879 557 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 PIAS1O75925 651 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 GOSR1O95249 250 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 DIRAS3O95661 229 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 IFNA7P01567 189 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 OPN1LWP04000 364 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SERPINA5P05154 406 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 APRTP07741 180 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 NMBP08949 121 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 LINC00614P0C842 121 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 HLA-EP13747 358 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 ATP6V1B2P21281 511 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 UQCRC2P22695 453 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 GLRA2P23416 452 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 CALCRP30988 508 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MAT2AP31153 395 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MPIP34949 423 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RORAP35398 523 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 DHPSP49366 369 aaPredicted RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 HNMTP50135 292 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 NPY4RP50391 375 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 NUDT2P50583 147 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 PLK1P53350 603 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RAB25P57735 213 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RRAS2P62070 204 aaPredicted RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 LSM3P62310 102 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RPS6P62753 249 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 DCDP81605 110 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 HOXC5Q00444 222 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 EMX1Q04741 257 aaPredicted RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MAB21L1Q13394 359 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 ART3Q13508 389 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 DDX39BQ13838 428 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SCARB2Q14108 478 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MESDQ14696 234 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 CD226Q15762 336 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 LGALSLQ3ZCW2 172 aaPredicted RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 DNLZQ5SXM8 178 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MLIPQ5VWP3 458 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MEDAGQ5VYS4 303 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 PTRHD1Q6GMV3 140 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 ASPHD2Q6ICH7 369 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RPL13AP3Q6NVV1 102 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 EPGNQ6UW88 154 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SPNS3Q6ZMD2 512 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 FAM92BQ6ZTR7 304 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 TPGS1Q6ZTW0 290 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms