RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 DRAM2Q6UX65 266 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 IZUMO2Q6UXV1 221 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.73■□□□□ 0.43
PMS1-211ENST00000424766 OR5L1Q8NGL2 311 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 ABHD4Q8TB40 342 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 NINJ1Q92982 152 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 MRPL24Q96A35 216 aaKnown RBP17.73■□□□□ 0.43
PMS1-211ENST00000424766 APOBEC3DQ96AK3 386 aaPredicted RBP17.73■□□□□ 0.43
PMS1-211ENST00000424766 RNFT2Q96EX2 444 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 ZNF799Q96GE5 643 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 TRAF4Q9BUZ4 470 aaPredicted RBP17.73■□□□□ 0.43
PMS1-211ENST00000424766 C1QTNF5Q9BXJ0 243 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 NIPAL2Q9H841 368 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 MRPS18AQ9NVS2 196 aaKnown RBP17.73■□□□□ 0.43
PMS1-211ENST00000424766 COPS3Q9UNS2 423 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 LAMP3Q9UQV4 416 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 EXOGQ9Y2C4 368 aaKnown RBP17.73■□□□□ 0.43
PMS1-211ENST00000424766 STARD10Q9Y365 291 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 LRBAP50851 2863 aa17.73■□□□□ 0.43
PMS1-211ENST00000424766 ARFGEF3Q5TH69 2177 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 H3BSA7 217 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 ZNF254O75437 659 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 DBTP11182 482 aaKnown RBP17.72■□□□□ 0.43
PMS1-211ENST00000424766 SELENOVP59797 346 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 ROM1Q03395 351 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 MSMPQ1L6U9 139 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 SWI5Q1ZZU3 235 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 MST1LQ2TV78 715 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 ZNF718Q3SXZ3 478 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 C6orf52Q5T4I8 152 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 RFPL4BQ6ZWI9 263 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 SPATC1Q76KD6 591 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 THAP5Q7Z6K1 395 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 KRT77Q7Z794 578 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 NAA40Q86UY6 237 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 MARS2Q96GW9 593 aaKnown RBP17.72■□□□□ 0.43
PMS1-211ENST00000424766 CCL19Q99731 98 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 RASSF4Q9H2L5 321 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 FBXO9Q9UK97 447 aaPredicted RBP17.72■□□□□ 0.43
PMS1-211ENST00000424766 PLEKHA6Q9Y2H5 1048 aa17.72■□□□□ 0.43
PMS1-211ENST00000424766 TMEM129A0AVI4 362 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 J3QRE1 110 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 HSD11B1P28845 292 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 PRKXP51817 358 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 CXCR4P61073 352 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 ERVS71-1P61550 626 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 ZNF91Q05481 1191 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 CDK5R2Q13319 367 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 KLHL22Q53GT1 634 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 C11orf71Q6IPW1 123 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 CDH24Q86UP0 819 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 ZNF679Q8IYX0 411 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 ZNF283Q8N7M2 679 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 CNIH3Q8TBE1 160 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 SYNPRQ8TBG9 265 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 SLC25A40Q8TBP6 338 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 FBLIM1Q8WUP2 373 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 MBD6Q96DN6 1003 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 MROQ9BYG7 248 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 PLK3Q9H4B4 646 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 SP140LQ9H930 580 aa17.71■□□□□ 0.43
PMS1-211ENST00000424766 OVOL3O00110 214 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 APOL3O95236 402 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 LCATP04180 440 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 BMP4P12644 408 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 GCH1P30793 250 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 DCTDP32321 178 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 SLC6A9P48067 706 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 EGR3Q06889 387 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 RAB40BQ12829 278 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 MBNL2Q5VZF2 373 aaKnown RBP17.7■□□□□ 0.42
PMS1-211ENST00000424766 ZNF322Q6U7Q0 402 aaPredicted RBP17.7■□□□□ 0.42
PMS1-211ENST00000424766 LRRN1Q6UXK5 716 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 KLF14Q8TD94 323 aaPredicted RBP17.7■□□□□ 0.42
PMS1-211ENST00000424766 LGALS12Q96DT0 336 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 OR8B4Q96RC9 309 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 DOK1Q99704 481 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 MRPL37Q9BZE1 423 aaKnown RBP17.7■□□□□ 0.42
PMS1-211ENST00000424766 OR2J1Q9GZK6 312 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 AMBNQ9NP70 447 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 SLCO1C1Q9NYB5 712 aa17.7■□□□□ 0.42
PMS1-211ENST00000424766 IGLV3-9A0A075B6K5 115 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 A0A1W2PQL4 384 aaPredicted RBP17.69■□□□□ 0.42
PMS1-211ENST00000424766 FADS2O95864 444 aaKnown RBP17.69■□□□□ 0.42
PMS1-211ENST00000424766 IGHV3-13P01766 116 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 CX3CR1P49238 355 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 KLF3P57682 345 aaPredicted RBP17.69■□□□□ 0.42
PMS1-211ENST00000424766 ACTC1P68032 377 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 ACTA1P68133 377 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 SMN1Q16637 294 aaKnown RBP17.69■□□□□ 0.42
PMS1-211ENST00000424766 MOGQ16653 247 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 ACBD7Q8N6N7 88 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 OR10H4Q8NGA5 316 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 CXorf56Q9H5V9 222 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 BEX4Q9NWD9 120 aaPredicted RBP17.69■□□□□ 0.42
PMS1-211ENST00000424766 DUSP13Q9UII6 198 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 LRP12Q9Y561 859 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 PMF1-BGLAPU3KQ54 211 aa17.69■□□□□ 0.42
PMS1-211ENST00000424766 TACC2O95359 2948 aa17.68■□□□□ 0.42
PMS1-211ENST00000424766 ANKRD17O75179 2603 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms