RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MT-ND4P03905 459 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TYMSP04818 313 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 OR5AL1P0C617 328 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 LIPCP11150 499 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 SLC2A2P11168 524 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 KCNE1P15382 129 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 RAB5AP20339 215 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 CRABP1P29762 137 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 SSTR2P30874 369 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 HRH1P35367 487 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 THBS3P49746 956 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 RIDAP52758 137 aaKnown RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 DLX6P56179 175 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 EIF4EBP2Q13542 120 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 GGTLC2Q14390 218 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 GUSBP1Q15486 140 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TRIP13Q15645 432 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 CYP51A1Q16850 503 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TPTE2P1Q5T6R2 138 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 UBE2UQ5VVX9 321 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 HBMQ6B0K9 141 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TRIM40Q6P9F5 258 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 DHRS4L2Q6PKH6 230 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM207Q6UWW9 146 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 GFRALQ6UXV0 394 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ADAMTSL5Q6ZMM2 481 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 C9orf47Q6ZRZ4 202 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM219Q86XT9 240 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 KIRREL3Q8IZU9 778 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ACOT4Q8N9L9 421 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF383Q8NA42 475 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 OR2T33Q8NG76 320 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 OR52N1Q8NH53 320 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 MPLKIPQ8TAP9 179 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 APOBEC4Q8WW27 367 aaKnown RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ZNRF4Q8WWF5 429 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 BORCS5Q969J3 196 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 FBXO17Q96EF6 278 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 MS4A14Q96JA4 679 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 POM121L2Q96KW2 1035 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF681Q96N22 645 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 IL17FQ96PD4 163 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 MS4A4EQ96PG1 132 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 OR5B12Q96R08 314 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 OR2V2Q96R30 315 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 NKX3-1Q99801 234 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 OVOL2Q9BRP0 275 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF2Q9BSG1 426 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 SLC25A33Q9BSK2 321 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM208Q9BTX3 173 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 PITPNM3Q9BZ71 974 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 BOLA2Q9H3K6 86 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF442Q9H7R0 627 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 UGT1A7Q9HAW7 530 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 RHOFQ9HBH0 211 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ZBTB20Q9HC78 741 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 TIGARQ9NQ88 270 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 INIPQ9NRY2 104 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 IMPAD1Q9NX62 359 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 PAK5Q9P286 719 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF391Q9UJN7 358 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 FBXO5Q9UKT4 447 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 SAMD4AQ9UPU9 718 aaKnown RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 NTNG1Q9Y2I2 539 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 SNX10Q9Y5X0 201 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 MROH7Q68CQ1 1323 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 METP08581 1390 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 SCRIBQ14160 1630 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 NOTCH4Q99466 2003 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TINCRA0A1B0GVN0 87 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 A6NDN8 102 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF724A8MTY0 619 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 B4DXG7 233 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 LOC110117498-PIK3R3F6TDL0 507 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 M0QZK8 103 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 LAD1O00515 517 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 UBDO15205 165 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 KLRC4O43908 158 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 PRKNO60260 465 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 MAGEC1O60732 1142 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CLDN14O95500 239 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ARG1P05089 322 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ALPLP05186 524 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 WNT2P09544 360 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 NBEAP1P0C6P0 100 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 LINC00271P0C7V0 271 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 BCL3P20749 454 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 PRKACGP22612 351 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 SLC2A5P22732 501 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 PTGDSP41222 190 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 SULT1A1P50225 295 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 SULT1A2P50226 295 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 P2RY4P51582 365 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 EFNA3P52797 238 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CRYBA2P53672 197 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 AQP5P55064 265 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CLDN12P56749 244 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 RPS14P62263 151 aaKnown RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 RPL24P83731 157 aaKnown RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 FLI1Q01543 452 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms