RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 RIDAP52758 137 aaKnown RBP11.66□□□□□ -0.54
PRPF39-202ENST00000424478 HIST1H3AP68431 136 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 PPA1Q15181 289 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 HIST2H3PS2Q5TEC6 136 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 TMPRSS11AQ6ZMR5 421 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 HIST2H3AQ71DI3 136 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF454Q8N9F8 522 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 OR51A4Q8NGJ6 313 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 BABAM2Q9NXR7 383 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 FZR1Q9UM11 496 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 IGHV1-18A0A0C4DH31 117 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 ANKRD61A6NGH8 418 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 LMX1BO60663 402 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 KIR3DL2P43630 455 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 LSM3P62310 102 aaKnown RBP11.66□□□□□ -0.54
PRPF39-202ENST00000424478 RAB35Q15286 201 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 SSX1Q16384 188 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 WDR38Q5JTN6 314 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 SLC30A7Q8NEW0 376 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 POFUT1Q9H488 388 aa11.66□□□□□ -0.54
PRPF39-202ENST00000424478 OR6C6A6NF89 314 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 M0R135 149 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 TBX1O43435 398 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 UBL3O95164 117 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 EPXP11678 715 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 PLA2G2AP14555 144 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF14P17017 642 aaPredicted RBP11.65□□□□□ -0.54
PRPF39-202ENST00000424478 SEZ6L2Q6UXD5 910 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 ASB5Q8WWX0 329 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 RPL3LQ92901 407 aaKnown RBP11.65□□□□□ -0.54
PRPF39-202ENST00000424478 ZNF799Q96GE5 643 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 RNF167Q9H6Y7 350 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 CALCRP30988 508 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 WNT5AP41221 380 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 PCBD1P61457 104 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 ROM1Q03395 351 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 EGR3Q06889 387 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 SLC25A35Q3KQZ1 300 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 SVOPQ8N4V2 548 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 MUL1Q969V5 352 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 MUCL1Q96DR8 90 aa11.65□□□□□ -0.54
PRPF39-202ENST00000424478 ASH1LQ9NR48 2969 aaKnown RBP11.65□□□□□ -0.55
PRPF39-202ENST00000424478 TRBV2A0A0J9YWF9 115 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 CLDN14O95500 239 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 LCATP04180 440 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 CRYGSP22914 178 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 ACTA2P62736 377 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 RPS25P62851 125 aaKnown RBP11.65□□□□□ -0.55
PRPF39-202ENST00000424478 ACTG2P63267 376 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 TIMM23BQ5SRD1 257 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 TMEM53Q6P2H8 277 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 OR52N1Q8NH53 320 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 ASB17Q8WXJ9 295 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 JAM3Q9BX67 310 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 ST6GALNAC2Q9UJ37 374 aa11.65□□□□□ -0.55
PRPF39-202ENST00000424478 LOC110117498-PIK3R3F6TDL0 507 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 P2RY10O00398 339 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 ZFPL1O95159 310 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 SERPINA5P05154 406 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 PLP2Q04941 152 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 HLXQ14774 488 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 FAM27D1Q5T7N8 215 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 VHLLQ6RSH7 139 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 COMMD2Q86X83 199 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 PIAS4Q8N2W9 510 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 OR2G2Q8NGZ5 317 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 NANOS1Q8WY41 292 aaKnown RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 RNASE6Q93091 150 aaKnown RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 TRMT61AQ96FX7 289 aaKnown RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 RADILQ96JH8 1075 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 POM121L2Q96KW2 1035 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 HDHD2Q9H0R4 259 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 SLC24A3Q9HC58 644 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 INPP5EQ9NRR6 644 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 DDX28Q9NUL7 540 aaKnown RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 FAM206AQ9NX38 181 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 ELOVL5Q9NYP7 299 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 IQCMA0A1B0GVH7 501 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 TRIM64CA6NLI5 447 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 ACSM4P0C7M7 580 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 ARR3P36575 388 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 NRN1LQ496H8 165 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 UBE2UQ5VVX9 321 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 RFPL4BQ6ZWI9 263 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 C1orf162Q8NEQ5 155 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 STEAP2Q8NFT2 490 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 OR8B12Q8NGG6 310 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 DOK1Q99704 481 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 NKX3-1Q99801 234 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-202ENST00000424478 HDHD5Q9BXW7 423 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 SPG11Q96JI7 2443 aa11.64□□□□□ -0.55
PRPF39-202ENST00000424478 SRSF10O75494 262 aaKnown RBP11.63□□□□□ -0.55
PRPF39-202ENST00000424478 SOX2P48431 317 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 GBX2P52951 348 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-202ENST00000424478 OR51E1Q8TCB6 317 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 RGP1Q92546 391 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-202ENST00000424478 GHSRQ92847 366 aa11.63□□□□□ -0.55
PRPF39-202ENST00000424478 COG8Q96MW5 612 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms