RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 LINC01006Q8NI28 216 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 RASSF5Q8WWW0 418 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 TMEM120AQ9BXJ8 343 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 SEMA6AQ9H2E6 1030 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 RABEP2Q9H5N1 569 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 CLN8Q9UBY8 286 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 MIOXQ9UGB7 285 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 LHFPL6Q9Y693 200 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 NOTCH3Q9UM47 2321 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 A0A0U1RQK1 487 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 CENPVL3A0A0U1RRI6 287 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 A0A1B0GW55 424 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 SURF4O15260 269 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 GPR137BO60478 399 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 NDUFA7O95182 113 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 CD14P08571 375 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4L2P0CJ85 424 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4L3P0CJ86 424 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4L4P0CJ87 422 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4L5P0CJ88 424 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4L6P0CJ89 424 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4L7P0CJ90 424 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 KDELR2P33947 212 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 GUCA1AP43080 201 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 FXYD6P3P58550 94 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 ST3GAL3Q11203 375 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 KRR1Q13601 381 aaKnown RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 OCLNQ16625 522 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 GPR157Q5UAW9 335 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 METTL21CQ5VZV1 264 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4L9Q6RFH8 374 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 OFCC1Q8IZS5 231 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 OR13G1Q8NGZ3 307 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 FAM110DQ8TAY7 271 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 FAM46AQ96IP4 442 aaKnown RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 ZNF582Q96NG8 517 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 ZNF570Q96NI8 536 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 ECSITQ9BQ95 431 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 POLR2J2Q9GZM3 115 aaKnown RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 NUAK2Q9H093 628 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 POLR2J3Q9H1A7 115 aaKnown RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 MMP27Q9H306 513 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 MMADHCQ9H3L0 296 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-203ENST00000420503 GRHPRQ9UBQ7 328 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 DUX4Q9UBX2 424 aa10.67□□□□□ -0.7
LINC00339-203ENST00000420503 IQCF6A8MYZ5 107 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 SOCS2O14508 198 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 MRASO14807 208 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 CRYBA1P05813 215 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 FPR3P25089 353 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 PSMB10P40306 273 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
LINC00339-203ENST00000420503 RAD23AP54725 363 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 PROK1P58294 105 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 POU4F2Q12837 409 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 ZNF730Q6ZMV8 503 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 CFAP77Q6ZQR2 320 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 PCYOX1LQ8NBM8 494 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 OR8J3Q8NGG0 315 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 FNDC8Q8TC99 324 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 PLEKHA8Q96JA3 519 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 TECTBQ96PL2 329 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 RPS6KA6Q9UK32 745 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
LINC00339-203ENST00000420503 FAM220BPB1ANY3 271 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 M0QZ24 198 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 XKRYO14609 159 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-203ENST00000420503 KHDRBS3O75525 346 aaKnown RBP10.65□□□□□ -0.7
LINC00339-203ENST00000420503 CDKN2AP42771 156 aaKnown RBP10.65□□□□□ -0.7
LINC00339-203ENST00000420503 SELENOWP63302 87 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 CYLC2Q14093 348 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-203ENST00000420503 GK2Q14410 553 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-203ENST00000420503 TRAM2Q15035 370 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 ZBED5Q49AG3 693 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 Q6ZSV7 163 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 ZNF826PQ6ZT77 177 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 NLRC3Q7RTR2 1065 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 GLB1L2Q8IW92 636 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 TSPEARQ8WU66 669 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 LHX4Q969G2 390 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 FNDC11Q9BVV2 318 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 CMTM6Q9NX76 183 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 ADA2Q9NZK5 511 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 POLR1DQ9Y2S0 133 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 IER3IP1Q9Y5U9 82 aa10.65□□□□□ -0.7
LINC00339-203ENST00000420503 IGHV3OR15-7A0A075B7D8 119 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 LOC100653049A0A140TA62 436 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 ZNF879B4DU55 563 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 PHYHO14832 338 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 ENSAO43768 121 aaKnown RBP10.64□□□□□ -0.71
LINC00339-203ENST00000420503 KRT34O76011 436 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 TOX4O94842 621 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms