RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 BRD7Q9NPI1 651 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 SLC7A10Q9NS82 523 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 CAMK2AQ9UQM7 478 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 SPENQ96T58 3664 aaKnown RBP18.41■□□□□ 0.54
GPC1-202ENST00000420138 LINC00854A0A1B0GVQ3 168 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 LOC107986453A0A1B0GWG9 222 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 IGHV3-9P01782 118 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 HLA-DQB1P01920 261 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 YES1P07947 543 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 ACSM4P0C7M7 580 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 ACHEP22303 614 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 BCL2L15Q5TBC7 163 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 TRIQKQ629K1 86 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 ZNF704Q6ZNC4 412 aaPredicted RBP18.41■□□□□ 0.54
GPC1-202ENST00000420138 Q6ZS92 163 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 PRSS45Q7RTY3 260 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 ADGRE4PQ86SQ3 457 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 CHAC2Q8WUX2 184 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 TSEN15Q8WW01 171 aaKnown RBP18.41■□□□□ 0.54
GPC1-202ENST00000420138 PHF3Q92576 2039 aaKnown RBP18.41■□□□□ 0.54
GPC1-202ENST00000420138 FOXB1Q99853 325 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 PLSCR2Q9NRY7 297 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 CYSLTR2Q9NS75 346 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 EXTL2Q9UBQ6 330 aa18.41■□□□□ 0.54
GPC1-202ENST00000420138 NUFIP1Q9UHK0 495 aaKnown RBP18.41■□□□□ 0.54
GPC1-202ENST00000420138 A0A0B4J203 849 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 HSD11B1P28845 292 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 PRKXP51817 358 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 CHMP1BQ7LBR1 199 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 C19orf18Q8NEA5 215 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 NEDD4LQ96PU5 975 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 TCF7L1Q9HCS4 588 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 PARPBPQ9NWS1 579 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 ZNF319Q9P2F9 582 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 HHLA2Q9UM44 414 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 SLC5A6Q9Y289 635 aa18.4■□□□□ 0.54
GPC1-202ENST00000420138 C1QTNF9BB2RNN3 333 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 P2RY10O00398 339 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 PDCD5O14737 125 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 ZNHIT1O43257 154 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 CST2P09228 141 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 C1QTNF9P0C862 333 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 UBCP0CG48 685 aaKnown RBP18.39■□□□□ 0.54
GPC1-202ENST00000420138 B4GALT1P15291 398 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 OTX1P32242 354 aaPredicted RBP18.39■□□□□ 0.54
GPC1-202ENST00000420138 TALDO1P37837 337 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 ZNF121P58317 390 aaPredicted RBP18.39■□□□□ 0.54
GPC1-202ENST00000420138 TMEM244Q5VVB8 128 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 NUFIP2Q7Z417 695 aaKnown RBP18.39■□□□□ 0.54
GPC1-202ENST00000420138 SAMD12Q8N8I0 201 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 THRSPQ92748 146 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 C11orf54Q9H0W9 315 aaPredicted RBP18.39■□□□□ 0.54
GPC1-202ENST00000420138 DHDHQ9UQ10 334 aa18.39■□□□□ 0.54
GPC1-202ENST00000420138 MGAQ8IWI9 3026 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 IFITM5A6NNB3 132 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 RPL36A-HNRNPH2H7BZ11 118 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 AQP7O14520 342 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 LMX1BO60663 402 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 GRB2P62993 217 aaKnown RBP18.39■□□□□ 0.53
GPC1-202ENST00000420138 TAF13Q15543 124 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 TBR1Q16650 682 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 ELFN2Q5R3F8 820 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 SLC22A24Q8N4F4 322 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 RBMXL3Q8N7X1 1067 aaKnown RBP18.39■□□□□ 0.53
GPC1-202ENST00000420138 OR5H6Q8NGV6 325 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 TRMT10AQ8TBZ6 339 aaKnown RBP18.39■□□□□ 0.53
GPC1-202ENST00000420138 KCNJ15Q99712 375 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 MOB1AQ9H8S9 216 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 ZNF175Q9Y473 711 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 V9GY05 133 aa18.39■□□□□ 0.53
GPC1-202ENST00000420138 A0A1B0GTI1 187 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 SLC22A20A6NK97 555 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 AIPO00170 330 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 PLA2G10O15496 165 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 EIF4EP06730 217 aaKnown RBP18.38■□□□□ 0.53
GPC1-202ENST00000420138 SLC2A1P11166 492 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 SNRPBP14678 240 aaKnown RBP18.38■□□□□ 0.53
GPC1-202ENST00000420138 IGFBP3P17936 291 aaPredicted RBP18.38■□□□□ 0.53
GPC1-202ENST00000420138 ZNF433Q8N7K0 673 aaPredicted RBP18.38■□□□□ 0.53
GPC1-202ENST00000420138 DNAAF1Q8NEP3 725 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 FGFBP3Q8TAT2 258 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 EXTL1Q92935 676 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 ABRACLQ9P1F3 81 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 DNAJC13O75165 2243 aa18.38■□□□□ 0.53
GPC1-202ENST00000420138 E9PLN8 166 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 CX3CR1P49238 355 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 EIF2B2P49770 351 aaKnown RBP18.37■□□□□ 0.53
GPC1-202ENST00000420138 FOXG1P55316 489 aaPredicted RBP18.37■□□□□ 0.53
GPC1-202ENST00000420138 CXADRP78310 365 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 CARTPTQ16568 116 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 AKAP14Q86UN6 197 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 NAA40Q86UY6 237 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 OR8B12Q8NGG6 310 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 SLITRK2Q9H156 845 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 CLCF1Q9UBD9 225 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 C5orf63A6NC05 138 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 MAS1P04201 325 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 STK11Q15831 433 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 NRN1LQ496H8 165 aa18.37■□□□□ 0.53
GPC1-202ENST00000420138 HES5Q5TA89 166 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms