RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ZNF20P17024 532 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CCR6P51684 374 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CLDN6P56747 220 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ACER2Q5QJU3 275 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PDSS1Q5T2R2 415 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MDGA2Q7Z553 956 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TMEM123Q8N131 208 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 JAGN1Q8N5M9 183 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR1M1Q8NGA1 313 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR10S1Q8NGN2 331 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR6N1Q8NGY5 312 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ASH2LQ9UBL3 628 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GHRLQ9UBU3 117 aa12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 FOXD3Q9UJU5 478 aaPredicted RBP12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 BOKQ9UMX3 212 aaPredicted RBP12.89□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MEIKINA0A087WXM9 373 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 A8MV72 311 aaPredicted RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CREBL2O60519 120 aaPredicted RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ICMTO60725 284 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TBPP20226 339 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 C4BPBP20851 252 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OTX2P32243 289 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 IFITM2Q01629 132 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 C19orf57Q0VDD7 668 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ECH1Q13011 328 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RNASE12Q5GAN4 147 aaKnown RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 RIPPLY2Q5TAB7 128 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CORO6Q6QEF8 472 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GLDNQ6ZMI3 551 aaPredicted RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CFAP77Q6ZQR2 320 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 NAXDQ8IW45 347 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TMEM229BQ8NBD8 167 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CPNE2Q96FN4 548 aaPredicted RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GNRHR2Q96P88 292 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SLC25A21Q9BQT8 299 aaPredicted RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ATG5Q9H1Y0 275 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PNRC2Q9NPJ4 139 aaKnown RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 B4GALT7Q9UBV7 327 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF391Q9UJN7 358 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PHF3Q92576 2039 aaKnown RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TEX51A0A1B0GUA7 166 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF814B7Z6K7 855 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 P2RY10O00398 339 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SSNA1O43805 119 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 DOK2O60496 412 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ENPP1P22413 925 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OTX1P32242 354 aaPredicted RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GNALP38405 381 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 HIST1H3AP68431 136 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MRPS34P82930 218 aaKnown RBP12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GALK2Q01415 458 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MEF2DQ14814 521 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 STK11Q15831 433 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 HIST2H3PS2Q5TEC6 136 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 Q6ZSR3 168 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 HIST2H3AQ71DI3 136 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF767PQ75MW2 155 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TMEM246Q9BRR3 403 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 NOX3Q9HBY0 568 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 P4HTMQ9NXG6 502 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SCP2D1Q9UJQ7 156 aa12.88□□□□□ -0.35
HLA-DPA1-242ENST00000419277 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 UBE2QL1A1L167 161 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 EIF1AYO14602 144 aaKnown RBP12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 DHHO43323 396 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CYB5AP00167 134 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CHRM2P08172 466 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 FCN2Q15485 313 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 WDFY1Q8IWB7 410 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GPR137CQ8N3F9 429 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CLEC1AQ8NC01 280 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR5M1Q8NGP8 315 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CCDC107Q8WV48 283 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PP6455Q8WZ26 134 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 FAM46BQ96A09 425 aa12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CPNE4Q96A23 557 aaPredicted RBP12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ALX4Q9H161 411 aaPredicted RBP12.87□□□□□ -0.35
HLA-DPA1-242ENST00000419277 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 GMDSO60547 372 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 MTRF1O75570 445 aaKnown RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 IGLV3-1P01715 115 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 CX3CR1P49238 355 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ZNF121P58317 390 aaPredicted RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 B3GALT5-AS1P59052 145 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ARL6IP1Q15041 203 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 FAM27BQ5VT28 67 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ABLIM2Q6H8Q1 611 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SEZ6L2Q6UXD5 910 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 ABHD12BQ7Z5M8 362 aaPredicted RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 C20orf196Q8IYI0 205 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 PNLDC1Q8NA58 520 aaKnown RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR52H1Q8NGJ2 320 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 OR14L1PQ8NHC6 308 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 SPTSSAQ969W0 71 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 FGGYQ96C11 551 aa12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 JSRP1Q96MG2 331 aaPredicted RBP12.86□□□□□ -0.35
HLA-DPA1-242ENST00000419277 BEX2Q9BXY8 128 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms