RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 HLA-DQA2P01906 255 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 SELEP16581 610 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 ADRA2CP18825 462 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 ZFP36P26651 326 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 MDH2P40926 338 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 SRP9P49458 86 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 MNAT1P51948 309 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 HMGA2P52926 109 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 RSPO1Q2MKA7 263 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 KRTAP27-1Q3LI81 207 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 SLC18B1Q6NT16 456 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 RPL13AP3Q6NVV1 102 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 PGBD2Q6P3X8 592 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 C12orf54Q6X4T0 127 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 ZNF620Q6ZNG0 422 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 LINC00346Q8IVM7 164 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 MUC20Q8N307 709 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 LINC00471Q8N535 108 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 SDR9C7Q8NEX9 313 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 OR52L1Q8NGH7 329 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 OR52E2Q8NGJ4 325 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 MEGF10Q96KG7 1140 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 PITX2Q99697 317 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 HCAR1Q9BXC0 346 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 C1QTNF5Q9BXJ0 243 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 GCM1Q9NP62 436 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 OPN4Q9UHM6 478 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 KCNG2Q9UJ96 466 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 RGS9O75916 674 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 ACSM4P0C7M7 580 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 CPT2P23786 658 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 FPR2P25090 351 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 SLC6A9P48067 706 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 HNRNPA0Q13151 305 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 ZMYND11Q15326 602 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 SLC35F1Q5T1Q4 408 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 BPIFB2Q8N4F0 458 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 ATF6BQ99941 703 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 SLC30A2Q9BRI3 323 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 TMEM100Q9NV29 134 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 CYB5R1Q9UHQ9 305 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 LYVE1Q9Y5Y7 322 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 CDH10Q9Y6N8 788 aa14.8□□□□□ -0.04
PDLIM2-208ENST00000416159 A8MXK9 166 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 F5H0A9 414 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 F5H5K5 113 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 TNFRSF11BO00300 401 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 ZNF823P16415 610 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 GGT2P36268 569 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 MMP16P51512 607 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 GYS2P54840 703 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 ESCO2Q56NI9 601 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 CFAP77Q6ZQR2 320 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 OR10AD1Q8NGE0 317 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 FAM216AQ8WUB2 273 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 POP5Q969H6 163 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 RBM4Q9BWF3 364 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 TRIM15Q9C019 465 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 FN3KQ9H479 309 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 ACTR3BQ9P1U1 418 aa14.79□□□□□ -0.04
PDLIM2-208ENST00000416159 H0YL77 283 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 FSHBP01225 129 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 LCATP04180 440 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 ZNF12P17014 697 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 RBMXP38159 391 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 TPTEP56180 551 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 ACTG1P63261 375 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 TRAP1Q12931 704 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 MALLQ13021 153 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 ZNF154Q13106 437 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 ZNF181Q2M3W8 571 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 CLEC12AQ5QGZ9 265 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 OR2T4Q8NH00 348 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 DDOQ99489 341 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 EGLN3Q9H6Z9 239 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 WDR76Q9H967 626 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 PNRC2Q9NPJ4 139 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 MMP26Q9NRE1 261 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 MRPL22Q9NWU5 206 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 IL20Q9NYY1 176 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 AUP1Q9Y679 476 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 DOCK11Q5JSL3 2073 aa14.78□□□□□ -0.04
PDLIM2-208ENST00000416159 A0A1B0GWJ7 208 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 LRRC30A6NM36 301 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 CEACAM18A8MTB9 384 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 TRAPPC2LH3BP13 241 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 BHLHE40O14503 412 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 MLNRO43193 412 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 CCNB2O95067 398 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 WNT2P09544 360 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 SEC61A1P61619 476 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 DBPQ10586 325 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 GK2Q14410 553 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 CYP2R1Q6VVX0 501 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 RASSF6Q6ZTQ3 369 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 NAA40Q86UY6 237 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 C1orf87Q8N0U7 546 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 ARHGAP24Q8N264 748 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 BHLHE23Q8NDY6 225 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms