RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 CIB1Q99828 191 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 PIMREGQ9BSJ6 248 aa13.93□□□□□ -0.18
NOD1-202ENST00000411552 DDX28Q9NUL7 540 aaKnown RBP13.93□□□□□ -0.18
NOD1-202ENST00000411552 YLPM1P49750 1951 aaKnown RBP13.92□□□□□ -0.18
NOD1-202ENST00000411552 ZFHX3Q15911 3703 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 NF1P21359 2839 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 PLSCR5A0PG75 271 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 VWC2LB2RUY7 222 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 PRODHO43272 600 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 SLC2A5P22732 501 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 GIFP27352 417 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 NR4A2P43354 598 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 ZNF81P51508 661 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 CCL8P80075 99 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 PPP2R2BQ00005 443 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 HLXQ14774 488 aaPredicted RBP13.92□□□□□ -0.18
NOD1-202ENST00000411552 PCGF3Q3KNV8 242 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 COLCA1Q6ZS62 124 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 Q71RC1 249 aaPredicted RBP13.92□□□□□ -0.18
NOD1-202ENST00000411552 DPY19L4Q7Z388 723 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 NAA40Q86UY6 237 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 TIGD4Q8IY51 512 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 C10orf67Q8IYJ2 551 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 OR5L1Q8NGL2 311 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 ST7LQ8TDW4 575 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 OSBPL10Q9BXB5 764 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 C1QTNF5Q9BXJ0 243 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 PTTG3PQ9NZH4 202 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 ENOPH1Q9UHY7 261 aa13.92□□□□□ -0.18
NOD1-202ENST00000411552 PURGQ9UJV8 347 aaKnown RBP13.92□□□□□ -0.18
NOD1-202ENST00000411552 ZSCAN5BA6NJL1 495 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 ZAR1LA6NP61 321 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 M0R129 80 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 M0R135 149 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 PRKYO43930 277 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 TIMM8AO60220 97 aaPredicted RBP13.91□□□□□ -0.18
NOD1-202ENST00000411552 HEXAP06865 529 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 KITLGP21583 273 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 TPTEP56180 551 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 KRTAP1-1Q07627 177 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 APOFQ13790 326 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 EIF2B1Q14232 305 aaKnown RBP13.91□□□□□ -0.18
NOD1-202ENST00000411552 SLX4IPQ5VYV7 408 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 SPATC1Q76KD6 591 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 OR6N2Q8NGY6 317 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 SPTSSAQ969W0 71 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 HAVCR1Q96D42 359 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 SLAMF6Q96DU3 332 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 ZNF799Q96GE5 643 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 COPS4Q9BT78 406 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 MSL2Q9HCI7 577 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 CYSLTR2Q9NS75 346 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 CENPMQ9NSP4 180 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 NKIRAS2Q9NYR9 191 aa13.91□□□□□ -0.18
NOD1-202ENST00000411552 CGGBP1Q9UFW8 167 aaPredicted RBP13.91□□□□□ -0.18
NOD1-202ENST00000411552 SPRY3O43610 288 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 SELENOFO60613 162 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 IGHV1-46P01743 117 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 LCATP04180 440 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 RAC2P15153 192 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 USF1P22415 310 aaPredicted RBP13.9□□□□□ -0.18
NOD1-202ENST00000411552 COL8A2P25067 703 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 OTX1P32242 354 aaPredicted RBP13.9□□□□□ -0.18
NOD1-202ENST00000411552 POLR2IP36954 125 aaKnown RBP13.9□□□□□ -0.18
NOD1-202ENST00000411552 LIPAP38571 399 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 SLC6A9P48067 706 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 RPS7P62081 194 aaKnown RBP13.9□□□□□ -0.18
NOD1-202ENST00000411552 LOXL1Q08397 574 aaPredicted RBP13.9□□□□□ -0.18
NOD1-202ENST00000411552 RIN1Q13671 783 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 TSTQ16762 297 aaKnown RBP13.9□□□□□ -0.18
NOD1-202ENST00000411552 SLC35D3Q5M8T2 416 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 C12orf73Q69YU5 71 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 FBXW12Q6X9E4 464 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 RDH5Q92781 318 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 YIPF5Q969M3 257 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 RBM4BQ9BQ04 359 aaKnown RBP13.9□□□□□ -0.18
NOD1-202ENST00000411552 ABHD6Q9BV23 337 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 GABARAPL3Q9BY60 117 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 BPESC1Q9GZL8 116 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 S100A14Q9HCY8 104 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 HIVEP2P31629 2446 aa13.9□□□□□ -0.18
NOD1-202ENST00000411552 CCDC182A6NF36 153 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 ZNF878C9JN71 531 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 ALPLP05186 524 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 ANOS1P23352 680 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 NAA10P41227 235 aaPredicted RBP13.89□□□□□ -0.19
NOD1-202ENST00000411552 MRPS11P82912 194 aaKnown RBP13.89□□□□□ -0.19
NOD1-202ENST00000411552 EFNB1P98172 346 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 GGTLC2Q14390 218 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 TAF13Q15543 124 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 ZMAT1Q5H9K5 638 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 SHFQ7M4L6 423 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 ZNF540Q8NDQ6 660 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 AMELYQ99218 206 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 KCNJ15Q99712 375 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 RIBC2Q9H4K1 309 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 DECR2Q9NUI1 292 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 ZDHHC8Q9ULC8 765 aa13.89□□□□□ -0.19
NOD1-202ENST00000411552 FN1P02751 2386 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms