RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 OR10AD1Q8NGE0 317 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 MEGF10Q96KG7 1140 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 NMNAT3Q96T66 252 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 CDADC1Q9BWV3 514 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 NDE1Q9NXR1 346 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 AUP1Q9Y679 476 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 TENM1Q9UKZ4 2725 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 LRRC30A6NM36 301 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 IQCF6A8MYZ5 107 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 DCTN6O00399 190 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 GPANK1O95872 356 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 HIST1H1CP16403 213 aaKnown RBP12.4□□□□□ -0.42
CBX3-203ENST00000409747 ZNF12P17014 697 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 ZNF154Q13106 437 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 SPATS1Q496A3 300 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 RPL13AP3Q6NVV1 102 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 ZBTB46Q86UZ6 589 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 C1orf87Q8N0U7 546 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 C3orf56Q8N813 242 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 DEFB108BQ8NET1 73 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 PITX2Q99697 317 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 ATF6BQ99941 703 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 SLC30A2Q9BRI3 323 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 SRA1Q9HD15 236 aaKnown RBP12.4□□□□□ -0.42
CBX3-203ENST00000409747 RPRD1BQ9NQG5 326 aaKnown RBP12.4□□□□□ -0.42
CBX3-203ENST00000409747 DDX28Q9NUL7 540 aaKnown RBP12.4□□□□□ -0.42
CBX3-203ENST00000409747 KCNG2Q9UJ96 466 aa12.4□□□□□ -0.42
CBX3-203ENST00000409747 ARPC2O15144 300 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 HLA-DQA2P01906 255 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 RRM2P31350 389 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 MALLQ13021 153 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 ZNF181Q2M3W8 571 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 SLC18B1Q6NT16 456 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 CORO6Q6QEF8 472 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 OR52L1Q8NGH7 329 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 OR4K13Q8NH42 304 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 GNPDA2Q8TDQ7 276 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 C1QTNF5Q9BXJ0 243 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 IL1RAPQ9NPH3 570 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 MMP26Q9NRE1 261 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 NUP50Q9UKX7 468 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 INSIG2Q9Y5U4 225 aa12.4□□□□□ -0.43
CBX3-203ENST00000409747 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 FSTL3O95633 263 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 RPS2P15880 293 aaKnown RBP12.39□□□□□ -0.43
CBX3-203ENST00000409747 GSSP48637 474 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 TSPAN31Q12999 210 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 KRTAP27-1Q3LI81 207 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 C16orf89Q6UX73 402 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 CFAP77Q6ZQR2 320 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 COLCA1Q6ZS62 124 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 LINC00471Q8N535 108 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 BHLHE23Q8NDY6 225 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 SDR9C7Q8NEX9 313 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
CBX3-203ENST00000409747 PLEKHA8Q96JA3 519 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 SSBP3Q9BWW4 388 aaPredicted RBP12.39□□□□□ -0.43
CBX3-203ENST00000409747 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
CBX3-203ENST00000409747 TMEM100Q9NV29 134 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 MIOXQ9UGB7 285 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 CD300AQ9UGN4 299 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 TAGLN3Q9UI15 199 aa12.39□□□□□ -0.43
CBX3-203ENST00000409747 NOP16Q9Y3C1 178 aaKnown RBP12.39□□□□□ -0.43
CBX3-203ENST00000409747 F5H5K5 113 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 KRT36O76013 467 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 ACSM4P0C7M7 580 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 IRF2P14316 349 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 SEC61A1P61619 476 aaKnown RBP12.38□□□□□ -0.43
CBX3-203ENST00000409747 TRAP1Q12931 704 aaKnown RBP12.38□□□□□ -0.43
CBX3-203ENST00000409747 HNRNPA0Q13151 305 aaKnown RBP12.38□□□□□ -0.43
CBX3-203ENST00000409747 BTNL3Q6UXE8 466 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 NLRC3Q7RTR2 1065 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 LINC00346Q8IVM7 164 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 ZDHHC21Q8IVQ6 265 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 C22orf15Q8WYQ4 148 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 SPTSSAQ969W0 71 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
CBX3-203ENST00000409747 A0A1B0GWJ7 208 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 OR6C68A6NDL8 312 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 MLNRO43193 412 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 PPIAL4GP0DN37 164 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 ZNF823P16415 610 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 GATA4P43694 442 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 TPTEP56180 551 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 UBA52P62987 128 aaKnown RBP12.37□□□□□ -0.43
CBX3-203ENST00000409747 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.37□□□□□ -0.43
CBX3-203ENST00000409747 ZDHHC22Q8N966 263 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 OR52E2Q8NGJ4 325 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 ZNF420Q8TAQ5 688 aaPredicted RBP12.37□□□□□ -0.43
CBX3-203ENST00000409747 ERGIC1Q969X5 290 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 WDR76Q9H967 626 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 ESM1Q9NQ30 184 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 CDH10Q9Y6N8 788 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 ARHGAP32A7KAX9 2087 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms