RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 RCC1LQ96I51 464 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 IP6K3Q96PC2 410 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 GPR174Q9BXC1 333 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 ARV1Q9H2C2 271 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 MTHFD2LQ9H903 347 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 WSB2Q9NYS7 404 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 GPR55Q9Y2T6 319 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 TMEM131Q92545 1883 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 ZFHX4Q86UP3 3567 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 PCNX2A6NKB5 2137 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 DUXAA6NLW8 204 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 C4orf47A7E2U8 309 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CDX4O14627 284 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TM4SF5O14894 197 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 NUDT21O43809 227 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 MED6O75586 246 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 JTBO76095 146 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 IGLV3-19P01714 112 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CSTBP04080 98 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 AMY2AP04746 511 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 MRPL3P09001 348 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 OR8G3PP0DMU2 310 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 NTSP30990 170 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 PRLHRP49683 370 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 NDUFA6P56556 154 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 DLK1P80370 383 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 OR7A5Q15622 319 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 HNRNPA1L2Q32P51 320 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF658BQ4V348 819 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 C9orf64Q5T6V5 341 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 PEAR1Q5VY43 1037 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CLEC9AQ6UXN8 241 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 MMP21Q8N119 569 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 KDM8Q8N371 416 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 BPIFB2Q8N4F0 458 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF614Q8N883 585 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 LFNGQ8NES3 379 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 OR9A1PQ8NGU1 263 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 OR10J5Q8NHC4 309 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TMEM239Q8WW34 195 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 RNF166Q96A37 237 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CCDC74AQ96AQ1 378 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SEC22AQ96IW7 307 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 PDCD1LG2Q9BQ51 273 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 NCOR1P1Q9H4R4 102 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 C6orf106Q9H6K1 298 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 PCYT1BQ9Y5K3 369 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TRAV18A0A075B6X5 111 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CEACAM18A8MTB9 384 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF736B4DX44 427 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TRDCB7Z8K6 153 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 C9J4A7 227 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SAP18O00422 153 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC17A2O00624 439 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 ZFPL1O95159 310 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 OR2C1O95371 312 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TBX6O95947 436 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CFIP05156 583 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 HEXBP07686 556 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 MAKP20794 623 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CXCR1P25024 350 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF136P52737 540 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CLDN12P56749 244 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 IL13RA1P78552 427 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 DUSP8Q13202 625 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 IL15RAQ13261 267 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 COTL1Q14019 142 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 CEBPEQ15744 281 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 UBE2V2Q15819 145 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SAPCD1Q5SSQ6 148 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 FAM46CQ5VWP2 391 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 OPN5Q6U736 354 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 WDR88Q6ZMY6 472 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TMED4Q7Z7H5 227 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 GPR137CQ8N3F9 429 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 PRSS35Q8N3Z0 413 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TRAM1L1Q8N609 369 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 OR10AD1Q8NGE0 317 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SECTM1Q8WVN6 248 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 MR1Q95460 341 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 MCHR2Q969V1 340 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 RRNAD1Q96FB5 475 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 PBDC1Q9BVG4 233 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 DPH1Q9BZG8 443 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC25A18Q9H1K4 315 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC35B3Q9H1N7 401 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SRMSQ9H3Y6 488 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 TAF9BQ9HBM6 251 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 LHX9Q9NQ69 397 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 GNG8Q9UK08 70 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 ZDHHC8Q9ULC8 765 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC7A7Q9UM01 511 aa9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 FCF1Q9Y324 198 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-204ENST00000409357 DMXL2Q8TDJ6 3036 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 CFAP47Q6ZTR5 3102 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 C1QTNF3-AMACRE9PGA6 284 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 PRAMEF26H0Y7S4 382 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 K7ERQ8 282 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 EFSO43281 561 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms