RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 CCDC54Q8NEL0 328 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 AKR7LQ8NHP1 331 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 HTRA1Q92743 480 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 BCL2L14Q9BZR8 327 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 RGCCQ9H4X1 137 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 TRIM36Q9NQ86 728 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 NPAP1Q9NZP6 1156 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 SPEF1Q9Y4P9 236 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 SNX5Q9Y5X3 404 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 TACC2O95359 2948 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
LIMS2-203ENST00000409254 A0A087WXM4 84 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 IGHV2OR16-5A0A0B4J2B6 119 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 PRSS44E7EML9 344 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 PTGES3LE9PB15 166 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 APOL3O95236 402 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 CD1AP06126 327 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 ACSM4P0C7M7 580 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 RNF224P0DH78 156 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 CFL1P23528 166 aaKnown RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 APEX1P27695 318 aaKnown RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 CCR9P51686 369 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 PIGFQ07326 219 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 DBPQ10586 325 aaPredicted RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 NCMAPQ5T1S8 102 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 LRRN1Q6UXK5 716 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 SSX6Q7RTT6 188 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 RPS4Y2Q8TD47 263 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 APOBEC3DQ96AK3 386 aaPredicted RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 AMELYQ99218 206 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 RHNO1Q9BSD3 238 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 TMEM204Q9BSN7 226 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 CDH20Q9HBT6 801 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 VCX3AQ9NNX9 186 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 EIF3KQ9UBQ5 218 aaKnown RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 NUFIP1Q9UHK0 495 aaKnown RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 MRM2Q9UI43 246 aaKnown RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 IKZF2Q9UKS7 526 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 R4GMQ9 66 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 DSCAMO60469 2012 aa11.29□□□□□ -0.6
LIMS2-203ENST00000409254 CHD3Q12873 2000 aaKnown RBP11.29□□□□□ -0.6
LIMS2-203ENST00000409254 LOC100509620A0A075B734 347 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 A0A0U1RQV5 110 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 C5orf49A4QMS7 147 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 SRSF10O75494 262 aaKnown RBP11.28□□□□□ -0.6
LIMS2-203ENST00000409254 HTR1AP08908 422 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 PATE4P0C8F1 98 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 CD53P19397 219 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 C21orf33P30042 268 aaPredicted RBP11.28□□□□□ -0.6
LIMS2-203ENST00000409254 RAD52P43351 418 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 ETV1P50549 477 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 GBX2P52951 348 aaPredicted RBP11.28□□□□□ -0.6
LIMS2-203ENST00000409254 TUBA1BP68363 451 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 GALK2Q01415 458 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 RSPO1Q2MKA7 263 aaPredicted RBP11.28□□□□□ -0.6
LIMS2-203ENST00000409254 LIPNQ5VXI9 398 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 ADAM5Q6NVV9 412 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 MEX3BQ6ZN04 569 aaKnown RBP11.28□□□□□ -0.6
LIMS2-203ENST00000409254 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 ZNF367Q7RTV3 350 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 WFDC8Q8IUA0 241 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 RFLNBQ8N5W9 214 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 OR5L1Q8NGL2 311 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 THRSPQ92748 146 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 PELI1Q96FA3 418 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 TBX5Q99593 518 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 CENPMQ9NSP4 180 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 SLCO1C1Q9NYB5 712 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 CRIM1Q9NZV1 1036 aa11.28□□□□□ -0.6
LIMS2-203ENST00000409254 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
LIMS2-203ENST00000409254 LSM2Q9Y333 95 aaKnown RBP11.28□□□□□ -0.6
LIMS2-203ENST00000409254 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
LIMS2-203ENST00000409254 FAM221AA4D161 298 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 MAGEA13PA6NCF6 341 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 DHRS7CA6NNS2 312 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 PRR32B1ATL7 298 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 M0R1B8 84 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 XRCC2O43543 280 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 MT-ND2P03891 347 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 CD3EP07766 207 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 UBCP0CG48 685 aaKnown RBP11.27□□□□□ -0.61
LIMS2-203ENST00000409254 ATP6V1B1P15313 513 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 CX3CR1P49238 355 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 ZNF83P51522 516 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 BSPH1Q075Z2 132 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 GPR50Q13585 617 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 SPHARQ15513 63 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 UBE2UQ5VVX9 321 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 RPL22L1Q6P5R6 122 aaKnown RBP11.27□□□□□ -0.61
LIMS2-203ENST00000409254 C22orf34Q6ZV56 151 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 PRSS45Q7RTY3 260 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 LHFPL3Q86UP9 236 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 ZNF283Q8N7M2 679 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 YIPF7Q8N8F6 280 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 TSPAN14Q8NG11 270 aa11.27□□□□□ -0.61
LIMS2-203ENST00000409254 SPSB4Q96A44 273 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms