RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 WDR76Q9H967 626 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 NECAP2Q9NVZ3 263 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 ZNRD1Q9P1U0 126 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 SIGLEC9Q9Y336 463 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 MED31Q9Y3C7 131 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 USH1CQ9Y6N9 552 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 OR6C6A6NF89 314 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 ANKRD61A6NGH8 418 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 A6NIZ1 184 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 IQCF6A8MYZ5 107 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
CHMP3-203ENST00000409225 FBP1P09467 338 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 TNFRSF1BP20333 461 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 MTPNP58546 118 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 RAP1BP61224 184 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 RAP1AP62834 184 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 MAB21L1Q13394 359 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 AQP6Q13520 282 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 PIN1Q13526 163 aaPredicted RBP13.74□□□□□ -0.21
CHMP3-203ENST00000409225 DLEU7Q6UYE1 221 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 VMO1Q7Z5L0 202 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 ITPKCQ96DU7 683 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 ECSITQ9BQ95 431 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 PPA2Q9H2U2 334 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 RIMS3Q9UJD0 308 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 FOXJ3Q9UPW0 622 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 SH3GLB1Q9Y371 365 aa13.74□□□□□ -0.21
CHMP3-203ENST00000409225 NOTCH3Q9UM47 2321 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 J3QW42 95 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 OR10H3O60404 316 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 OR5F1O95221 314 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 OR8B8Q15620 311 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 MPPED2Q15777 294 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 KCNJ8Q15842 424 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 AGKQ53H12 422 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 CCDC92Q53HC0 331 aaPredicted RBP13.73□□□□□ -0.21
CHMP3-203ENST00000409225 EPGNQ6UW88 154 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 BTN2A1Q7KYR7 527 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 MICU2Q8IYU8 434 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 LRRC75AQ8NAA5 344 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 ERGIC1Q969X5 290 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 APOBEC3DQ96AK3 386 aaPredicted RBP13.73□□□□□ -0.21
CHMP3-203ENST00000409225 FBLN5Q9UBX5 448 aa13.73□□□□□ -0.21
CHMP3-203ENST00000409225 TRAV27A0A087WT01 109 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 LGALS8O00214 317 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 POLR3GO15318 223 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-203ENST00000409225 IFI30P13284 250 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 RAD23AP54725 363 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 PRB3Q04118 309 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-203ENST00000409225 TNFAIP8L3Q5GJ75 292 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 INTS11Q5TA45 600 aaKnown RBP13.72□□□□□ -0.21
CHMP3-203ENST00000409225 C11orf87Q6NUJ2 197 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 C1orf122Q6ZSJ8 110 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 LYG1Q8N1E2 194 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 CELF2-AS1Q8N7Q2 184 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 OR51A7Q8NH64 312 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 LRRC8CQ8TDW0 803 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 RNF7Q9UBF6 113 aa13.72□□□□□ -0.21
CHMP3-203ENST00000409225 CAB39Q9Y376 341 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-203ENST00000409225 A0A1B0GWJ7 208 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 A0A1W2PRD5 423 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 A0A1W2PRF3 423 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 A0A1W2PRM7 423 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 TMEM120BA0PK00 339 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 RER1O15258 196 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 GYPAP02724 150 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 CD200P41217 278 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 CRYBA2P53672 197 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 BEND6Q5SZJ8 279 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-203ENST00000409225 RASSF5Q8WWW0 418 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 BPIFA2Q96DR5 249 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 HCAR1Q9BXC0 346 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 POLR2J2Q9GZM3 115 aaKnown RBP13.71□□□□□ -0.21
CHMP3-203ENST00000409225 POLR2J3Q9H1A7 115 aaKnown RBP13.71□□□□□ -0.21
CHMP3-203ENST00000409225 RERGLQ9H628 205 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 CNTD2Q9H8S5 307 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 ONECUT1Q9UBC0 465 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 DNAJB11Q9UBS4 358 aa13.71□□□□□ -0.21
CHMP3-203ENST00000409225 XPNPEP2O43895 674 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 FCN3O75636 299 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 CTLA4P16410 223 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 CDONQ4KMG0 1287 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 KLHDC1Q8N7A1 406 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 ST8SIA4Q92187 359 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 PHF21AQ96BD5 680 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 FN3KRPQ9HA64 309 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 SIRT7Q9NRC8 400 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 ADAM18Q9Y3Q7 739 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 KPTNQ9Y664 436 aa13.7□□□□□ -0.22
CHMP3-203ENST00000409225 TRAV38-1A0A0B4J264 116 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 TEX13CA0A0J9YWL9 993 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 A0A1B0GVI7 797 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 RNASEK-C17orf49H0YIS7 233 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 DVL1O14640 695 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 MPIG6BO95866 241 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 OR1E2P47887 323 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 EFNB2P52799 333 aa13.69□□□□□ -0.22
CHMP3-203ENST00000409225 POU4F2Q12837 409 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms