RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 IFT81Q8WYA0 676 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 CIDECQ96AQ7 238 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 OTUB2Q96DC9 234 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 PIK3IP1Q96FE7 263 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 RMND5BQ96G75 393 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 HINT2Q9BX68 163 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 HES7Q9BYE0 225 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR52A5Q9H2C5 316 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 RETNQ9HD89 108 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 DMAP1Q9NPF5 467 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 DIABLOQ9NR28 239 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 BATF3Q9NR55 127 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 CCL28Q9NRJ3 127 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SAMSN1Q9NSI8 373 aaKnown RBP3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 NAGKQ9UJ70 344 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 GOLT1BQ9Y3E0 138 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC25A15Q9Y619 301 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SAR1BQ9Y6B6 198 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 A0A1B0GVI7 797 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 LINC00587B1AMM8 73 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 LAD1O00515 517 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 TOX3O15405 576 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC31A2O15432 143 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 SCELO95171 688 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 IFNA6P05013 189 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 HPNP05981 417 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 DCNP07585 359 aaKnown RBP3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR4E1P0C645 316 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 ACSM4P0C7M7 580 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 CBR1P16152 277 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 SERPINB5P36952 375 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 GPX4P36969 197 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 NBL1P41271 181 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 PRPS1P60891 318 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 YIF1BQ5BJH7 314 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 METTL21CQ5VZV1 264 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 MBOAT1Q6ZNC8 495 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 THOC6Q86W42 341 aaKnown RBP3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 RALGPS2Q86X27 583 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR52N1Q8NH53 320 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 NUBPLQ8TB37 319 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 LRRC20Q8TCA0 184 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 NTAN1Q96AB6 310 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 LRRC58Q96CX6 371 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 C9orf72Q96LT7 481 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 MBOAT7Q96N66 472 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 CSPG4P5Q96PW8 444 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 SEC22CQ9BRL7 303 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 ANGPTL4Q9BY76 406 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR11A1Q9GZK7 315 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 ROGDIQ9GZN7 287 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 PLGRKTQ9HBL7 147 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 PRSS16Q9NQE7 514 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 TREX1Q9NSU2 369 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 FADS3Q9Y5Q0 445 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 ERBINQ96RT1 1412 aa3.5□□□□□ -1.85
HMGB1P13-201ENST00000406019 ADAMTS9Q9P2N4 1935 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 TRAV39A0A0B4J263 110 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZNF816-ZNF321PA0A0X1KG74 233 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 TMEM238C9JI98 176 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 PRAMEF26H0Y7S4 382 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 PSIP1O75475 530 aaKnown RBP3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 AQP8O94778 261 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 AHSA1O95433 338 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 C6orf47O95873 294 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 DHFRP00374 187 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 SERPINA6P08185 405 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 GKN3PP0CG01 181 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CT45A6P0DMU7 189 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CT45A5P0DMU8 189 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CT45A7P0DMV0 189 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 RAB4AP20338 218 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CNR1P21554 472 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 SYT1P21579 422 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 AK4P27144 223 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 IL12BP29460 328 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 SPAM1P38567 509 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CCR8P51685 355 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 EMP2P54851 167 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 UBE2MP61081 183 aaKnown RBP3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 TNNC1P63316 161 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLAMF1Q13291 335 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 ARFRP1Q13795 201 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 DGCR6Q14129 220 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 GGTLC2Q14390 218 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZNF726P1Q15940 193 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 NRF1Q16656 503 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 COQ5Q5HYK3 327 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CT45A1Q5HYN5 189 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC25A30Q5SVS4 291 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CYB5R2Q6BCY4 276 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 PRMT9Q6P2P2 845 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 Q6ZR54 194 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 TMEM61Q8N0U2 210 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 GPD1LQ8N335 351 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CD177Q8N6Q3 437 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 CCDC112Q8NEF3 446 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR5T1Q8NG75 326 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR5D18Q8NGL1 313 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR1N2Q8NGR9 330 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms