RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CCDC172P0C7W6 258 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 TCP1P17987 556 aaKnown RBP2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 GABRG2P18507 467 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 ATF6P18850 670 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 SRMP19623 302 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 HERVK_113P61574 105 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 RPS23P62266 143 aaKnown RBP2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 CACNG7P62955 275 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 SYCNQ0VAF6 134 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 FAM83EQ2M2I3 478 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 NKAIN1Q4KMZ8 207 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 UBE2UQ5VVX9 321 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 FAM122BQ7Z309 247 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 ABHD12BQ7Z5M8 362 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 ZNF695Q8IW36 515 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 PRSS58Q8IYP2 241 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 CHST4Q8NCG5 386 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR8K3Q8NH51 312 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR51F2Q8NH61 342 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 ABHD3Q8WU67 409 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 MRGPRFQ96AM1 343 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 LRRC39Q96DD0 335 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 RNF145Q96MT1 663 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 NAA50Q9GZZ1 169 aaKnown RBP2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 LINC00597Q9H2U6 94 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 HAUS4Q9H6D7 363 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 MRM3Q9HC36 420 aaKnown RBP2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 OR12D3Q9UGF7 316 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 CFAP45Q9UL16 551 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 UBIAD1Q9Y5Z9 338 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 DENND4AQ7Z401 1863 aa2.41□□□□□ -2.02
HMGB1P17-201ENST00000403495 SMIM26A0A096LP01 95 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGHV5-10-1A0A0J9YXX1 117 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 TSPAN11A1L157 253 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 GABRR3A8MPY1 467 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 NDUFS8O00217 210 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 AQP8O94778 261 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 FGFR1OPO95684 399 aaKnown RBP2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 TGM6O95932 706 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 PAHP00439 452 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF806P0C7X5 589 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 STAG3L2P0CL84 134 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 ERGP11308 486 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 IL32P24001 234 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 SSTR5P35346 364 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 HCAR3P49019 387 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 P2RX1P51575 399 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 VSX2P58304 361 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 UBE2NP61088 152 aaKnown RBP2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 RAD51Q06609 339 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 DMTNQ08495 405 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 RBMY1FQ15415 496 aaKnown RBP2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 PGGHGQ32M88 737 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 BEX5Q5H9J7 111 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 GCSAMLQ5JQS6 135 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 THEM4Q5T1C6 240 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF691Q5VV52 312 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 SAXO2Q658L1 398 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 NPSR1Q6W5P4 371 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 LINC00523Q86TU6 105 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 CBR4Q8N4T8 237 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 C8orf31Q8N9H6 132 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 C11orf72Q8NBR9 251 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 NOXO1Q8NFA2 376 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR5AR1Q8NGP9 310 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 SYNPRQ8TBG9 265 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 PIFOQ8TCI5 191 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 NTAN1Q96AB6 310 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 NRBF2Q96F24 287 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 CERS2Q96G23 380 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 TIMM17AQ99595 171 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 IL22Q9GZX6 179 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 SYNDIG1Q9H7V2 258 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 UBE2ZQ9H832 354 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 NTN4Q9HB63 628 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 PATZ1Q9HBE1 687 aaKnown RBP2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLC39A1Q9NY26 324 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 CTSFQ9UBX1 484 aa2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 YARS2Q9Y2Z4 477 aaKnown RBP2.4□□□□□ -2.03
HMGB1P17-201ENST00000403495 PIK3R4Q99570 1358 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 GPATCH8Q9UKJ3 1502 aaKnown RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGKV1-8A0A0C4DH67 115 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 A0A1W2PPV4 95 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 SYCE1LA8MT33 242 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLC19A2O60779 497 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 SLC25A14O95258 325 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 TDP2O95551 362 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 RETP07949 1114 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 ADRA2AP08913 450 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 PGA4P0DJD7 388 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 PGA3P0DJD8 388 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF32P17041 273 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 TCN2P20062 427 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 RAB4AP20338 218 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 PTNP21246 168 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 USF1P22415 310 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 WARSP23381 471 aaKnown RBP2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 CD82P27701 267 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 MNAT1P51948 309 aa2.39□□□□□ -2.03
HMGB1P17-201ENST00000403495 NDUFA8P51970 172 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms