RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGKV1D-42A0A075B6H8 117 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 TRBV5-7A0A0A0MS05 114 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 H2AFB1P0C5Y9 115 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF10P21506 573 aaPredicted RBP8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 ZBTB25P24278 435 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 RIPPLY1Q0D2K3 151 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 PJVKQ0ZLH3 352 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 MGAT2Q10469 447 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 C2orf27AQ580R0 203 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 AGBL4Q5VU57 503 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 RPL7L1Q6DKI1 246 aaKnown RBP8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 COX15Q7KZN9 410 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 PPP1R3BQ86XI6 285 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 CDC20BQ86Y33 519 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 OR4D6Q8NGJ1 314 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF524Q96C55 264 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 TSPAN32Q96QS1 320 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 ALX4Q9H161 411 aaPredicted RBP8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 FBXL21Q9UKT6 434 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 COL4A6Q14031 1691 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 CRHP06850 196 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 PTAFRP25105 342 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 TSFMP43897 325 aaKnown RBP8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 S100A12P80511 92 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 RASGEF1BQ0VAM2 473 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF345Q14585 488 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 CD226Q15762 336 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF595Q8IYB9 648 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 MCHR2Q969V1 340 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 PHYHIPLQ96FC7 376 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 IP6K3Q96PC2 410 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 C1orf198Q9H425 327 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 Q9N2J8 555 aa8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 NUP210Q8TEM1 1887 aaPredicted RBP8.86□□□□□ -0.99
PTCHD4-202ENST00000398738 LOC101059948A0A1B0GTJ6 334 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 A0A1W2PPH5 198 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 SERINC4A6NH21 518 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 COLCA2A8K830 154 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 SDCBPO00560 298 aaPredicted RBP8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 NKX2-2O95096 273 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 IFNA4P05014 189 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC25A4P12235 298 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF44P15621 663 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 MAOAP21397 527 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 LPAR6P43657 344 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 MICBQ29980 383 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ACER2Q5QJU3 275 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 NPSR1Q6W5P4 371 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF813Q6ZN06 617 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF600Q6ZNG1 722 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 TTLL10Q6ZVT0 673 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 FAM24BQ8N5W8 94 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 METTL21AQ8WXB1 218 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC17A9Q9BYT1 436 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 P2RY10O00398 339 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 CYR61O00622 381 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 CD1AP06126 327 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 CSRP1P21291 193 aaKnown RBP8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZP2Q05996 745 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF616Q08AN1 781 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF74Q16587 644 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 COMMD2Q86X83 199 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZNF101Q8IZC7 436 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 CD300LFQ8TDQ1 290 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ASB5Q8WWX0 329 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 ZFYVE21Q9BQ24 234 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 RCC2Q9P258 522 aaKnown RBP8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 PILRAQ9UKJ1 303 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 AMDHD2Q9Y303 409 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 FREM3P0C091 2139 aa8.85□□□□□ -0.99
PTCHD4-202ENST00000398738 KNG1P01042 644 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 CXCL10P02778 98 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 CD74P04233 296 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 TACR3P29371 465 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 PPM1AP35813 382 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 IGFALSP35858 605 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 HAAOP46952 286 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC17A1Q14916 467 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 CNKSR3Q6P9H4 555 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 DHRS11Q6UWP2 260 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 DNM1P46Q6ZS02 220 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC25A42Q86VD7 318 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 OR13C9Q8NGT0 318 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 MITD1Q8WV92 249 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 ANKRD9Q96BM1 317 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 PRRT1Q99946 306 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 APOOQ9BUR5 198 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 RNF126Q9BV68 326 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 SEC11CQ9BY50 192 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 MMP26Q9NRE1 261 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 SMCO4Q9NRQ5 59 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 KIAA0100Q14667 2235 aaKnown RBP8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 MED12Q93074 2177 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 SCGB1D2O95969 90 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 AK1P00568 194 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 GLI4P10075 376 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 NME1P15531 152 aaKnown RBP8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 GDI1P31150 447 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 RAB32Q13637 225 aa8.84□□□□□ -0.99
PTCHD4-202ENST00000398738 C5orf46Q6UWT4 87 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms