RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ABHD6Q9BV23 337 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 RAB1BQ9H0U4 201 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 IMPAD1Q9NX62 359 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 SLCO1C1Q9NYB5 712 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 IGHV3-13P01766 116 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 ERCC1P07992 297 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 SLC6A9P48067 706 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 TPTEP56180 551 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 LRRC36Q1X8D7 754 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 CLEC12BQ2HXU8 276 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 MEPCEQ7L2J0 689 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 GID4Q8IVV7 300 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 SNX33Q8WV41 574 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 C1QTNF5Q9BXJ0 243 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 PTTG3PQ9NZH4 202 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 GPR160Q9UJ42 338 aa18.14■□□□□ 0.49
TSPAN4-206ENST00000397408 SLC22A31A6NKX4 558 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 E9PQ18 207 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 F12P00748 615 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 LYNP07948 512 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 NAT2P11245 290 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 TUBG1P23258 451 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 PEX2P28328 305 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 OTX1P32242 354 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 PRKXP51817 358 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 LPCAT4Q643R3 524 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 COLCA1Q6ZS62 124 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 SLC16A9Q7RTY1 509 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 ZNF454Q8N9F8 522 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 OR5L1Q8NGL2 311 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 THEM6Q8WUY1 208 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 RNF133Q8WVZ7 376 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 CNN2Q99439 309 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 MS4A5Q9H3V2 200 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 TUBG2Q9NRH3 451 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 DNAJC27Q9NZQ0 273 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 KLHDC2Q9Y2U9 406 aa18.13■□□□□ 0.49
TSPAN4-206ENST00000397408 LCATP04180 440 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 SLC15A1P46059 708 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 GRB2P62993 217 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 GGTLC2Q14390 218 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 MOGQ16653 247 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 NAA40Q86UY6 237 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 GALNT4Q8N4A0 578 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 ZNF525Q8N782 197 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 GTF3AQ92664 365 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 KCNJ15Q99712 375 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 YIPF3Q9GZM5 350 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 LAMP5Q9UJQ1 280 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 GMPPBQ9Y5P6 360 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 ACANP16112 2415 aa18.12■□□□□ 0.49
TSPAN4-206ENST00000397408 TRIM64A6NGJ6 449 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 TRIM64BA6NI03 449 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 TIMM8AO60220 97 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 MT-ND5P03915 603 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 HSD11B1P28845 292 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 HCCSP53701 268 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 PSG7Q13046 419 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 HLXQ14774 488 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 DRAM2Q6UX65 266 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 NEU4Q8WWR8 484 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 UBE2FQ969M7 185 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 CMBLQ96DG6 245 aa18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 ZNF582Q96NG8 517 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 SMPD3Q9NY59 655 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-206ENST00000397408 PLSCR5A0PG75 271 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 SLC2A1P11166 492 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 OPRL1P41146 370 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 CLEC2AQ6UVW9 174 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 DNM1P46Q6ZS02 220 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 ZNF283Q8N7M2 679 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 TRUB1Q8WWH5 349 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 RDH12Q96NR8 316 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 DCLRE1BQ9H816 532 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 ADGRL4Q9HBW9 690 aa18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 WARS2Q9UGM6 360 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 PURGQ9UJV8 347 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-206ENST00000397408 C17orf100A8MU93 164 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 H2BFMP0C1H6 154 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 RAC2P15153 192 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 ALOX5APP20292 161 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 ANOS1P23352 680 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 HTR1FP30939 366 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 CX3CR1P49238 355 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 MMP15P51511 669 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 SNAI3Q3KNW1 292 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 FBXW12Q6X9E4 464 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 C8orf4Q9NR00 106 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 FAM118AQ9NWS6 357 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 HAO2Q9NYQ3 351 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 COPS3Q9UNS2 423 aa18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 ZNF469Q96JG9 3925 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-206ENST00000397408 DLGAP1O14490 977 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 CD99P14209 185 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 KITLGP21583 273 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 ZNF81P51508 661 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 MALLQ13021 153 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 TNK1Q13470 666 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 LRRN1Q6UXK5 716 aa18.08■□□□□ 0.49
TSPAN4-206ENST00000397408 RHOUQ7L0Q8 258 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms