RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CLDN4O14493 209 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 AKR1C4P17516 323 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 HSD17B7P56937 341 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 IL13RA1P78552 427 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 NUP54Q7Z3B4 507 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 SLC26A10Q8NG04 563 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 OR10S1Q8NGN2 331 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 ELP5Q8TE02 316 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 PAQR8Q8TEZ7 354 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 TXNIPQ9H3M7 391 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 SLC39A1Q9NY26 324 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 UPB1Q9UBR1 384 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 HSPB2A8KAH6 182 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 PRAMEF26H0Y7S4 382 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 XKRYO14609 159 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 STK17BO94768 372 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 TNFP01375 233 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 PMP2P02689 132 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 RPL35P42766 123 aaKnown RBP12.41□□□□□ -0.42
NUP98-204ENST00000397004 RIDAP52758 137 aaKnown RBP12.41□□□□□ -0.42
NUP98-204ENST00000397004 HSPB2Q16082 182 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 ASB17Q8WXJ9 295 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 FGGYQ96C11 551 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 PHYHIPLQ96FC7 376 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 SLC6A15Q9H2J7 730 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 CSAG2Q9Y5P2 127 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 R4GMQ9 66 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 A0A1W2PP11 408 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 MS4A18H0YCH9 400 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 H3BMH7 237 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 PHYHO14832 338 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 ZNF354AO60765 605 aaPredicted RBP12.41□□□□□ -0.42
NUP98-204ENST00000397004 ADAP1O75689 374 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 CRHP06850 196 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 GABRG2P18507 467 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 CXCR1P25024 350 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 MS4A18Q3C1V0 323 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 TMEM104Q8NE00 496 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 MARCH1Q8TCQ1 289 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 ARL5BQ96KC2 179 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 PIGMQ9H3S5 423 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 MKL2Q9ULH7 1088 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 FAM96BQ9Y3D0 163 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 MEX3AA1L020 520 aaKnown RBP12.41□□□□□ -0.42
NUP98-204ENST00000397004 C9JQL5 133 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 PI3P19957 117 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 SERPINF1P36955 418 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 FLI1Q01543 452 aaPredicted RBP12.41□□□□□ -0.42
NUP98-204ENST00000397004 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
NUP98-204ENST00000397004 PLAC9Q5JTB6 97 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 TMEM17Q86X19 198 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 ZNF584Q8IVC4 421 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 TMED6Q8WW62 240 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 OR52A1Q9UKL2 312 aa12.41□□□□□ -0.42
NUP98-204ENST00000397004 KIR2DS5A0A0G2JLQ3 304 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 A0A0G2JNG1 304 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 SPTY2D1-AS1A0A0U1RR47 76 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 KIR2DS3K7RE56 304 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 VAMP1P23763 118 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 KIR2DS5Q14953 304 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 OR5AC2Q9NZP5 309 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 DISC1C4P0D8 188 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 FTCDNL1E5RQL4 147 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 TSPAN2O60636 221 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 RAD51DO75771 328 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 ISG15P05161 165 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 MPZP25189 248 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 YPEL5P62699 121 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 SUPT4H1P63272 117 aaKnown RBP12.4□□□□□ -0.42
NUP98-204ENST00000397004 DTX1Q86Y01 620 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 C1orf147Q96MC9 270 aaPredicted RBP12.4□□□□□ -0.42
NUP98-204ENST00000397004 TSNAXQ99598 290 aaKnown RBP12.4□□□□□ -0.42
NUP98-204ENST00000397004 LRRC61Q9BV99 259 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 PRODH2Q9UF12 536 aa12.4□□□□□ -0.42
NUP98-204ENST00000397004 MRPS33Q9Y291 106 aaKnown RBP12.4□□□□□ -0.42
NUP98-204ENST00000397004 IGKV3D-11A0A0A0MRZ8 115 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 A0A0B4J2A0 478 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 EIF1AYO14602 144 aaKnown RBP12.4□□□□□ -0.43
NUP98-204ENST00000397004 ZNF208O43345 1280 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 TTRP02766 147 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 EBPQ15125 230 aaKnown RBP12.4□□□□□ -0.43
NUP98-204ENST00000397004 RNASE10Q5GAN6 216 aaKnown RBP12.4□□□□□ -0.43
NUP98-204ENST00000397004 ETV3LQ6ZN32 361 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 C5orf66Q9H5L9 145 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 SHPKQ9UHJ6 478 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 HHLA2Q9UM44 414 aa12.4□□□□□ -0.43
NUP98-204ENST00000397004 BRWD1Q9NSI6 2320 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 TRBV6-7A0A0A0MS04 114 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 FRG2CA6NGY1 282 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 SHISA7A6NL88 538 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 PRKXP51817 358 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 LPCAT3Q6P1A2 487 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 FAM206AQ9NX38 181 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 MED29Q9NX70 200 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 TMED7-TICAM2A0A0A6YYA0 188 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 C13orf42A0A1B0GVH6 325 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 TMEM200CA6NKL6 621 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 OR6A2O95222 327 aa12.39□□□□□ -0.43
NUP98-204ENST00000397004 NUDT14O95848 222 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms