RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 H7C417 338 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 PEX14O75381 377 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 CX3CR1P49238 355 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 C1orf100Q5SVJ3 147 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 HES3Q5TGS1 186 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 OR2V1Q8NHB1 315 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 OR51E1Q8TCB6 317 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 PTX4Q96A99 478 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 ZNF385AQ96PM9 386 aaKnown RBP14.3□□□□□ -0.12
SNX6-202ENST00000396526 FYTTD1Q96QD9 318 aaKnown RBP14.3□□□□□ -0.12
SNX6-202ENST00000396526 ZNF416Q9BWM5 594 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 MTFP1Q9UDX5 166 aa14.3□□□□□ -0.12
SNX6-202ENST00000396526 C7orf66A4D0T2 115 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 SULT1C2O00338 296 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 ATP6V1G1O75348 118 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 CLDN6P56747 220 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 ZNF121P58317 390 aaPredicted RBP14.29□□□□□ -0.12
SNX6-202ENST00000396526 PCGF3Q3KNV8 242 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 FAM166AQ6J272 317 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 DOK3Q7L591 496 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 GPR137CQ8N3F9 429 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 SCMH1Q96GD3 660 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 UQCC2Q9BRT2 126 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 SLCO5A1Q9H2Y9 848 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 RAB22AQ9UL26 194 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 A0A0A6YYJ9 748 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 TMEM272A0A1B0GTI8 110 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 FAM172BPA6NC97 362 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 SSNA1O43805 119 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 AIMP2Q13155 320 aaKnown RBP14.29□□□□□ -0.12
SNX6-202ENST00000396526 CD276Q5ZPR3 534 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 SLC25A25Q6KCM7 469 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 CLEC1AQ8NC01 280 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 OR10S1Q8NGN2 331 aa14.29□□□□□ -0.12
SNX6-202ENST00000396526 GCDHQ92947 438 aaPredicted RBP14.29□□□□□ -0.12
SNX6-202ENST00000396526 GPN1Q9HCN4 374 aaPredicted RBP14.29□□□□□ -0.12
SNX6-202ENST00000396526 PMS2P1A4D2B8 440 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 SLC6A9P48067 706 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 AAED1Q7RTV5 226 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 SPTSSAQ969W0 71 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 SCPEP1Q9HB40 452 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 WIPI1Q5MNZ9 446 aaPredicted RBP14.28□□□□□ -0.12
SNX6-202ENST00000396526 OLFML2AQ68BL7 652 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 FGD2Q7Z6J4 655 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 OR51A2Q8NGJ7 313 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 CPNE4Q96A23 557 aaPredicted RBP14.28□□□□□ -0.12
SNX6-202ENST00000396526 B3GNT4Q9C0J1 378 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 C20orf85Q9H1P6 137 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 CXCL13O43927 109 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 KLK2P20151 261 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 RAB6AP20340 208 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 ZNF133P52736 654 aaPredicted RBP14.28□□□□□ -0.12
SNX6-202ENST00000396526 DCAF10Q5QP82 559 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 NCCRP1Q6ZVX7 275 aaPredicted RBP14.28□□□□□ -0.12
SNX6-202ENST00000396526 FAM57BQ71RH2 274 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 CCDC54Q8NEL0 328 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 GPR84Q9NQS5 396 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 PLEK2Q9NYT0 353 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 ZNF222Q9UK12 451 aa14.28□□□□□ -0.12
SNX6-202ENST00000396526 TMIGD3P0DMS9 266 aaPredicted RBP14.27□□□□□ -0.12
SNX6-202ENST00000396526 GABRA1P14867 456 aa14.27□□□□□ -0.12
SNX6-202ENST00000396526 METTL11BQ5VVY1 283 aa14.27□□□□□ -0.12
SNX6-202ENST00000396526 OR13C9Q8NGT0 318 aa14.27□□□□□ -0.12
SNX6-202ENST00000396526 PSMF1Q92530 271 aa14.27□□□□□ -0.12
SNX6-202ENST00000396526 FAM46BQ96A09 425 aa14.27□□□□□ -0.12
SNX6-202ENST00000396526 TRAF4Q9BUZ4 470 aaPredicted RBP14.27□□□□□ -0.12
SNX6-202ENST00000396526 SLC5A6Q9Y289 635 aa14.27□□□□□ -0.12
SNX6-202ENST00000396526 C1QBP02746 253 aa14.27□□□□□ -0.13
SNX6-202ENST00000396526 AKAIN1P0CW23 69 aa14.27□□□□□ -0.13
SNX6-202ENST00000396526 CD37P11049 281 aa14.27□□□□□ -0.13
SNX6-202ENST00000396526 GTF2F2P13984 249 aa14.27□□□□□ -0.13
SNX6-202ENST00000396526 CD96P40200 585 aa14.27□□□□□ -0.13
SNX6-202ENST00000396526 ZNF782Q6ZMW2 699 aaPredicted RBP14.27□□□□□ -0.13
SNX6-202ENST00000396526 TMEM123Q8N131 208 aa14.27□□□□□ -0.13
SNX6-202ENST00000396526 GIMAP1Q8WWP7 306 aa14.27□□□□□ -0.13
SNX6-202ENST00000396526 FAM71F1Q96KD3 344 aaPredicted RBP14.27□□□□□ -0.13
SNX6-202ENST00000396526 LOC390937A0A1W2PQ73 354 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 F5H5K5 113 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 SMAD9O15198 467 aaKnown RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 MTRF1O75570 445 aaKnown RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 ANXA3P12429 323 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 CSRP1P21291 193 aaKnown RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 CTSSP25774 331 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 SELENOPP49908 381 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 EFNB2P52799 333 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 B3GALT5-AS1P59052 145 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 MRPS34P82930 218 aaKnown RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 SPEM2Q0P670 501 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 TRIP6Q15654 476 aaKnown RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 NDUFA5Q16718 116 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 GFOD2Q3B7J2 385 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 C20orf196Q8IYI0 205 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 FAM210AQ96ND0 272 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 GHITMQ9H3K2 345 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 METTL17Q9H7H0 456 aaPredicted RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 NOX3Q9HBY0 568 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 MRPS18BQ9Y676 258 aaKnown RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
SNX6-202ENST00000396526 SLC2A1P11166 492 aa14.26□□□□□ -0.13
SNX6-202ENST00000396526 SUCLG1P53597 346 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms