RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 C9J4A7 227 aa12.9□□□□□ -0.34
SREBF1-205ENST00000395757 F5H5P2 479 aa12.9□□□□□ -0.34
SREBF1-205ENST00000395757 NUDT21O43809 227 aaKnown RBP12.9□□□□□ -0.34
SREBF1-205ENST00000395757 RAF1P04049 648 aa12.9□□□□□ -0.34
SREBF1-205ENST00000395757 QDPRP09417 244 aa12.9□□□□□ -0.34
SREBF1-205ENST00000395757 DEFA5Q01523 94 aa12.9□□□□□ -0.34
SREBF1-205ENST00000395757 MUC20Q8N307 709 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-205ENST00000395757 GALNT16Q8N428 558 aa12.9□□□□□ -0.34
SREBF1-205ENST00000395757 EIF4E2O60573 245 aaKnown RBP12.9□□□□□ -0.35
SREBF1-205ENST00000395757 GLSO94925 669 aaPredicted RBP12.9□□□□□ -0.35
SREBF1-205ENST00000395757 GABRR1P24046 479 aa12.9□□□□□ -0.35
SREBF1-205ENST00000395757 S100A10P60903 97 aa12.9□□□□□ -0.35
SREBF1-205ENST00000395757 RBMS2Q15434 407 aaKnown RBP12.9□□□□□ -0.35
SREBF1-205ENST00000395757 HLA-BQ31612 363 aa12.9□□□□□ -0.35
SREBF1-205ENST00000395757 C3P1Q6ZMU1 363 aa12.9□□□□□ -0.35
SREBF1-205ENST00000395757 HDDC2Q7Z4H3 204 aa12.9□□□□□ -0.35
SREBF1-205ENST00000395757 LIN37Q96GY3 246 aaPredicted RBP12.9□□□□□ -0.35
SREBF1-205ENST00000395757 MRPS18BQ9Y676 258 aaKnown RBP12.9□□□□□ -0.35
SREBF1-205ENST00000395757 IGHV3-64DA0A0J9YX35 117 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 FAM221AA4D161 298 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 RGS13O14921 159 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 DAP3P51398 398 aaKnown RBP12.89□□□□□ -0.35
SREBF1-205ENST00000395757 LCN10Q6JVE6 187 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 BAIAP2L2Q6UXY1 529 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 LINC00114Q6XXX2 140 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 OR5L2Q8NGL0 311 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 OR10Z1Q8NGY1 313 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 SRPK3Q9UPE1 567 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 SCGB1D2O95969 90 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 APOC3P02656 99 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 PTBP1P26599 531 aaKnown RBP eCLIP12.89□□□□□ -0.35
SREBF1-205ENST00000395757 LAP3P28838 519 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 CD34P28906 385 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 AVPR2P30518 371 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 NPY4RP50391 375 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 TEX261Q6UWH6 196 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 CREB3L2Q70SY1 520 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 ZBTB44Q8NCP5 570 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 STEAP2Q8NFT2 490 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 ZNF501Q96CX3 271 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-205ENST00000395757 UBL7Q96S82 380 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-205ENST00000395757 C1orf198Q9H425 327 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 GPR84Q9NQS5 396 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 ZNF230Q9UIE0 474 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-205ENST00000395757 U3KQ87 197 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 FAM230AA0A1W2PPH8 454 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 TLX3O43711 291 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-205ENST00000395757 IGKV3-11P04433 115 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 SFTPBP07988 381 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 C4BPBP20851 252 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 SLC25A1P53007 311 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 PER3P56645 1201 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 C2orf68Q2NKX9 166 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 DCAF12L2Q5VW00 463 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 UNQ6126/PRO20091Q6UXV3 157 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 ANKRD37Q7Z713 158 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 RTN4RL2Q86UN3 420 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 NAA40Q86UY6 237 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 GABRG1Q8N1C3 465 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 OR4D6Q8NGJ1 314 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 ZC3HAV1LQ96H79 300 aaKnown RBP12.89□□□□□ -0.35
SREBF1-205ENST00000395757 ZNF160Q9HCG1 818 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 CHST11Q9NPF2 352 aa12.89□□□□□ -0.35
SREBF1-205ENST00000395757 NUP210Q8TEM1 1887 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-205ENST00000395757 RP2O75695 350 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 ZNF432O94892 652 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-205ENST00000395757 TOR2AQ5JU69 321 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 VASH2Q86V25 355 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 OR1J2Q8NGS2 313 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
SREBF1-205ENST00000395757 ZFP64Q9NPA5 681 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 A0A1B0GV50 99 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 F5H0A9 414 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-205ENST00000395757 TRIM77I1YAP6 450 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 GLIPR1L1Q6UWM5 242 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 CPEB2Q7Z5Q1 589 aaKnown RBP12.88□□□□□ -0.35
SREBF1-205ENST00000395757 ASB5Q8WWX0 329 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
SREBF1-205ENST00000395757 SHISA7A6NL88 538 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 TOR1AO14656 332 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 PHYHO14832 338 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 VSIG10L2P0DP72 767 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 ACHEP22303 614 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 GALP22466 123 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 BDKRB2P30411 391 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 ZNF93P35789 620 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-205ENST00000395757 DLX5P56178 289 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 RPS4XP62701 263 aaKnown RBP12.87□□□□□ -0.35
SREBF1-205ENST00000395757 IL13RA1P78552 427 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 NR0B2Q15466 257 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 ZBTB37Q5TC79 503 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 TCEAL6Q6IPX3 200 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 FJX1Q86VR8 437 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-205ENST00000395757 NEK7Q8TDX7 302 aa12.87□□□□□ -0.35
SREBF1-205ENST00000395757 TCEAL3Q969E4 200 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms