RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TDGQ13569 410 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 PHF19Q5T6S3 580 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 ATPAF1Q5TC12 328 aaPredicted RBP14.5□□□□□ -0.09
PCDH1-203ENST00000394536 GPBAR1Q8TDU6 330 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 SLAMF6Q96DU3 332 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 LMAN1LQ9HAT1 526 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 ZNF160Q9HCG1 818 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 PCOLCE2Q9UKZ9 415 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 B3GALT1Q9Y5Z6 326 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 SVILO95425 2214 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 OR2F2O95006 317 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 ABOP16442 354 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 CNR1P21554 472 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 LBX1P52954 281 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 OR2F1Q13607 317 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 GGTLC2Q14390 218 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 RBM39Q14498 530 aaKnown RBP14.5□□□□□ -0.09
PCDH1-203ENST00000394536 NHLRC3Q5JS37 347 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 SPIN3Q5JUX0 258 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 H1FNTQ75WM6 255 aaPredicted RBP14.5□□□□□ -0.09
PCDH1-203ENST00000394536 WNT2BQ93097 391 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 S1PR5Q9H228 398 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 PTGES2Q9H7Z7 377 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 EDARQ9UNE0 448 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 IGKV1D-42A0A075B6H8 117 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 G3V3Y1 287 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 ADH6P28332 368 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 CDAP32320 146 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 PAN3Q58A45 887 aaKnown RBP14.49□□□□□ -0.09
PCDH1-203ENST00000394536 TMEM156Q8N614 296 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 OR52N4Q8NGI2 321 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 OR1S2Q8NGQ3 325 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 DNTTIP1Q9H147 329 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 SLC25A32Q9H2D1 315 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 SCPEP1Q9HB40 452 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 PLEKHJ1Q9NW61 149 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 TRBV11-1A0A0K0K1C0 115 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 TUBAL3A6NHL2 446 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 TGFBR3LH3BV60 316 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 ABCD3P28288 659 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 PPT1P50897 306 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 SLC26A5P58743 744 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 DCAF7P61962 342 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 HSF1Q00613 529 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 ZNF660Q6AZW8 331 aaPredicted RBP14.49□□□□□ -0.09
PCDH1-203ENST00000394536 ASB5Q8WWX0 329 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 HOXB13Q92826 284 aaPredicted RBP14.49□□□□□ -0.09
PCDH1-203ENST00000394536 ARL5BQ96KC2 179 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 GFI1Q99684 422 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 C8orf33Q9H7E9 229 aaPredicted RBP14.49□□□□□ -0.09
PCDH1-203ENST00000394536 RBM7Q9Y580 266 aaKnown RBP14.49□□□□□ -0.09
PCDH1-203ENST00000394536 MRPS18BQ9Y676 258 aaKnown RBP14.49□□□□□ -0.09
PCDH1-203ENST00000394536 R4GMQ9 66 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 GVINP1Q7Z2Y8 2422 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 SLC22A23A1A5C7 686 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 H0YIG0 161 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 RAB6AP20340 208 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 SKP2Q13309 424 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 RAET1LQ5VY80 246 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 OR1M1Q8NGA1 313 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 THSD7BQ9C0I4 1608 aa14.49□□□□□ -0.09
PCDH1-203ENST00000394536 ZDBF2Q9HCK1 2354 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 PET100P0DJ07 73 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 DLX2Q07687 328 aaPredicted RBP14.48□□□□□ -0.09
PCDH1-203ENST00000394536 MOGAT2Q3SYC2 334 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 CDCA3Q99618 268 aaPredicted RBP14.48□□□□□ -0.09
PCDH1-203ENST00000394536 ADAT1Q9BUB4 502 aaKnown RBP14.48□□□□□ -0.09
PCDH1-203ENST00000394536 RPS10P5Q9NQ39 176 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 YBX2Q9Y2T7 364 aaKnown RBP14.48□□□□□ -0.09
PCDH1-203ENST00000394536 SULT2B1O00204 365 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 WRBO00258 174 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 GPR31O00270 319 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 HSD11B2P80365 405 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 RIPPLY1Q0D2K3 151 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 STK11Q15831 433 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 LYG2Q86SG7 212 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 TMEM229BQ8NBD8 167 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 LHFPL5Q8TAF8 219 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 GABRG3Q99928 467 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 PIGMQ9H3S5 423 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 CNTD2Q9H8S5 307 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 KCNIP3Q9Y2W7 256 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 TRIOBPQ9H2D6 2365 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 EIF4E2O60573 245 aaKnown RBP14.48□□□□□ -0.09
PCDH1-203ENST00000394536 LMX1BO60663 402 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 PDSS1Q5T2R2 415 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 RNF141Q8WVD5 230 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 PLEK2Q9NYT0 353 aa14.48□□□□□ -0.09
PCDH1-203ENST00000394536 CCDC163A0A0D9SF12 145 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 FAM230AA0A1W2PPH8 454 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 TMEM200CA6NKL6 621 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.47□□□□□ -0.09
PCDH1-203ENST00000394536 RGS7BPQ6MZT1 257 aaPredicted RBP14.47□□□□□ -0.09
PCDH1-203ENST00000394536 GLRX5Q86SX6 157 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 NAXDQ8IW45 347 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 PIGTQ969N2 578 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 MMP17Q9ULZ9 603 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 COL4A4P53420 1690 aaPredicted RBP14.47□□□□□ -0.09
PCDH1-203ENST00000394536 BLACEA4D250 179 aa14.47□□□□□ -0.09
PCDH1-203ENST00000394536 B3GALNT1O75752 331 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms