RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 IGFBP5P24593 272 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 RASSF2P50749 326 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 SLC25A1P53007 311 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 MVKQ03426 396 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 RSPO1Q2MKA7 263 aaPredicted RBP26.11■■□□□ 1.77
CMTM4-202ENST00000394106 LINC01356Q8N9X3 169 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 PAPD5Q8NDF8 572 aaKnown RBP26.11■■□□□ 1.77
CMTM4-202ENST00000394106 OR6K6Q8NGW6 343 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 BEX2Q9BXY8 128 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 NMNAT2Q9BZQ4 307 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 WDR76Q9H967 626 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 COMMD3-BMI1R4GMX3 469 aa26.11■■□□□ 1.77
CMTM4-202ENST00000394106 KIAA1324LA8MWY0 1029 aaPredicted RBP26.1■■□□□ 1.77
CMTM4-202ENST00000394106 RAC2P15153 192 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 PRKACGP22612 351 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 FMO3P31513 532 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 GRK5P34947 590 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 TNFAIP6P98066 277 aaPredicted RBP26.1■■□□□ 1.77
CMTM4-202ENST00000394106 OR5AS1Q8N127 324 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 ZNF511Q8NB15 262 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 OR2Z1Q8NG97 314 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 CCL17Q92583 94 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 OTULINQ96BN8 352 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 SHARPINQ9H0F6 387 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 CMC2Q9NRP2 79 aa26.1■■□□□ 1.77
CMTM4-202ENST00000394106 CLDN25C9JDP6 229 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 ATP5HO75947 161 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 SPARCP09486 303 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 ACSM4P0C7M7 580 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 PSKH1P11801 424 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 CDK5R2Q13319 367 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 KRTAP27-1Q3LI81 207 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 SPRNQ5BIV9 151 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 FBXW12Q6X9E4 464 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 Q6ZR03 302 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 MED20Q9H944 212 aa26.09■■□□□ 1.77
CMTM4-202ENST00000394106 FAM183AA6NL82 134 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 TIPRLO75663 272 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 CD55P08174 381 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 TNFSF4P23510 183 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 ENTPD1P49961 510 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 CDH15P55291 814 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 OR2T2Q6IF00 324 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 SLC27A4Q6P1M0 643 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 OR10S1Q8NGN2 331 aa26.08■■□□□ 1.77
CMTM4-202ENST00000394106 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP26.08■■□□□ 1.764e-7■■■■□ 26.6
CMTM4-202ENST00000394106 LCATP04180 440 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 GINS1Q14691 196 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 IL17RELQ6ZVW7 336 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 DCXRQ7Z4W1 244 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 NAA40Q86UY6 237 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 ATG16L2Q8NAA4 619 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 TIMD4Q96H15 378 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 HCAR1Q9BXC0 346 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 C1QTNF5Q9BXJ0 243 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 LPAR3Q9UBY5 353 aa26.07■■□□□ 1.76
CMTM4-202ENST00000394106 ZNF593O00488 134 aaPredicted RBP26.06■■□□□ 1.76
CMTM4-202ENST00000394106 OSMP13725 252 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 ANXA8P13928 327 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 TPTEP56180 551 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 FAM120AOSQ5T036 256 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 COLCA1Q6ZS62 124 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 SPTSSAQ969W0 71 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 C1orf159Q96HA4 380 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 WIPI2Q9Y4P8 454 aa26.06■■□□□ 1.76
CMTM4-202ENST00000394106 M0R135 149 aa26.05■■□□□ 1.76
CMTM4-202ENST00000394106 DEAF1O75398 565 aaPredicted RBP26.05■■□□□ 1.76
CMTM4-202ENST00000394106 SLC6A9P48067 706 aa26.05■■□□□ 1.76
CMTM4-202ENST00000394106 HNRNPA0Q13151 305 aaKnown RBP26.05■■□□□ 1.76
CMTM4-202ENST00000394106 ACSM5Q6NUN0 579 aa26.05■■□□□ 1.76
CMTM4-202ENST00000394106 RAB1CQ92928 201 aa26.05■■□□□ 1.76
CMTM4-202ENST00000394106 ZNF799Q96GE5 643 aa26.05■■□□□ 1.76
CMTM4-202ENST00000394106 NTN4Q9HB63 628 aa26.05■■□□□ 1.76
CMTM4-202ENST00000394106 KIF17Q9P2E2 1029 aa26.05■■□□□ 1.76
CMTM4-202ENST00000394106 TANC2Q9HCD6 1990 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 FAM157AC9JC47 383 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 PAICSP22234 425 aaKnown RBP26.04■■□□□ 1.76
CMTM4-202ENST00000394106 BLVRAP53004 296 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 PRSS12P56730 875 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 SHQ1Q6PI26 577 aaKnown RBP26.04■■□□□ 1.76
CMTM4-202ENST00000394106 BHLHE23Q8NDY6 225 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 ZNF582Q96NG8 517 aaPredicted RBP26.04■■□□□ 1.76
CMTM4-202ENST00000394106 COPS4Q9BT78 406 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 LPAR2Q9HBW0 351 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 CENPMQ9NSP4 180 aa26.04■■□□□ 1.76
CMTM4-202ENST00000394106 DDX28Q9NUL7 540 aaKnown RBP26.04■■□□□ 1.76
CMTM4-202ENST00000394106 B4DSR2 109 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 FAM157CP0CG43 387 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 LMO4P61968 165 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 SLC3A1Q07837 685 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 MALLQ13021 153 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 TAF13Q15543 124 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 CR1LQ2VPA4 569 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 LINC01590Q5TEZ4 76 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 C1orf146Q5VVC0 180 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 OR8G5Q8NG78 346 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 ITLN1Q8WWA0 313 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 SLAMF6Q96DU3 332 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 OR51V1Q9H2C8 321 aa26.03■■□□□ 1.76
CMTM4-202ENST00000394106 MMADHCQ9H3L0 296 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms