RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 SULT2B1O00204 365 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 DCTN6O00399 190 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 MSTNO14793 375 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SPP1P10451 314 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF43P17038 809 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 EMDP50402 254 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 GUK1Q16774 197 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 PUSL1Q8N0Z8 303 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 AMER3Q8N944 861 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 C19orf47Q8N9M1 422 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 CLEC1AQ8NC01 280 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 HAS2Q92819 552 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 TOMM40LQ969M1 308 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 TSACCQ96A04 125 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SEH1LQ96EE3 360 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 FAM71F1Q96KD3 344 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF75AQ96N20 296 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ADOQ96SZ5 270 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SUCNR1Q9BXA5 334 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SLC35B3Q9H1N7 401 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF160Q9HCG1 818 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 PIPOXQ9P0Z9 390 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 MYLKQ15746 1914 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 LRP5LA4QPB2 252 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SEC14L6B5MCN3 397 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 RPS4Y1P22090 263 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ITGB8P26012 769 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 BLVRBP30043 206 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 VIPR2P41587 438 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SLC26A5P58743 744 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 TAF9Q16594 264 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 PRICKLE4Q2TBC4 344 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 CHRDL2Q6WN34 429 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 DCXRQ7Z4W1 244 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 KLHDC7BQ96G42 594 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 NUDT16L1Q9BRJ7 211 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 PAPOLGQ9BWT3 736 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 TMEM231Q9H6L2 316 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF638Q14966 1978 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 PRAMEF27A3QJZ7 478 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 HYAL3O43820 417 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 LRP3O75074 770 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 GAPDHP04406 335 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ADRA2AP08913 450 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 LAP3P28838 519 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 OR7A5Q15622 319 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 FAM185AQ8N0U4 392 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 RBMXL1Q96E39 390 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 CMSS1Q9BQ75 279 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 NRIP2Q9BQI9 281 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 C8orf33Q9H7E9 229 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SLC2A8Q9NY64 477 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 KCMF1Q9P0J7 381 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 GDF2Q9UK05 429 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ZMIZ1Q9ULJ6 1067 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 RHBDD3Q9Y3P4 386 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 PLXNA3P51805 1871 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 A0A1W2PPV9 198 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 J3QRE1 110 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 HOXC4P09017 264 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 TBXA2RP21731 343 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ACKR1Q16570 336 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 JMJD6Q6NYC1 403 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 SLC36A1Q7Z2H8 476 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 OR5AP2Q8NGF4 316 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 KISS1RQ969F8 398 aaPredicted RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 PRRX2Q99811 253 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ZNF442Q9H7R0 627 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 ZMAT3Q9HA38 289 aaKnown RBP7.78□□□□□ -1.16
GABRA1-202ENST00000393943 FRRS1LQ9P0K9 344 aa7.78□□□□□ -1.16
GABRA1-202ENST00000393943 FAM74A7A6NL05 159 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
GABRA1-202ENST00000393943 ADAM11O75078 769 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 NSA2O95478 260 aaKnown RBP7.77□□□□□ -1.17
GABRA1-202ENST00000393943 CBR1P16152 277 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 NFYBP25208 207 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 AVPR2P30518 371 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 OR1D4P47884 311 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 LSM11P83369 360 aaKnown RBP eCLIP7.77□□□□□ -1.17
GABRA1-202ENST00000393943 PRSS53Q2L4Q9 553 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 FAM74A3Q4VXF1 159 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 IGSF11Q5DX21 431 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 H1FNTQ75WM6 255 aaPredicted RBP7.77□□□□□ -1.17
GABRA1-202ENST00000393943 CBLN2Q8IUK8 224 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 ZNF610Q8N9Z0 462 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 BORCS8Q96FH0 119 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 POLR2AP24928 1970 aaKnown RBP7.77□□□□□ -1.17
GABRA1-202ENST00000393943 TRBV5-7A0A0A0MS05 114 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 NPIPA2E9PIF3 369 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 NPIPA3F8WFD2 350 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 PRAMEF26H0Y7S4 382 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 PPM1DO15297 605 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 IL33O95760 270 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 DDAH2O95865 285 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 TXNDC12O95881 172 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 RECKO95980 971 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 H2AFB1P0C5Y9 115 aa7.77□□□□□ -1.17
GABRA1-202ENST00000393943 SNU13P55769 128 aaKnown RBP7.77□□□□□ -1.17
GABRA1-202ENST00000393943 POU3F1Q03052 451 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms