RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PCBD1P61457 104 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 HIST1H3AP68431 136 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 SCRN3Q0VDG4 424 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 RAB35Q15286 201 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 HIST2H3PS2Q5TEC6 136 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 ZNF585AQ6P3V2 769 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 HIST2H3AQ71DI3 136 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 OR8H2Q8N162 312 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 SAMD12Q8N8I0 201 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 DNAAF1Q8NEP3 725 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 OR8B12Q8NGG6 310 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 AKR7LQ8NHP1 331 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 OR51E1Q8TCB6 317 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 SLC7A6Q92536 515 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 ZNF71Q9NQZ8 489 aaPredicted RBP7.58□□□□□ -1.2
TDP1-203ENST00000393454 DDX28Q9NUL7 540 aaKnown RBP7.58□□□□□ -1.2
TDP1-203ENST00000393454 MALT1Q9UDY8 824 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 NUFIP1Q9UHK0 495 aaKnown RBP7.58□□□□□ -1.2
TDP1-203ENST00000393454 PRSS50Q9UI38 385 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 LHX6Q9UPM6 363 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 TP53TG5Q9Y2B4 290 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 RAXQ9Y2V3 346 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 TIMM10BQ9Y5J6 103 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 SVILO95425 2214 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 MED12LQ86YW9 2145 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 LMX1BO60663 402 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 DBHP09172 617 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 AZGP1P25311 298 aaKnown RBP7.58□□□□□ -1.2
TDP1-203ENST00000393454 THBS2P35442 1172 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 FOXG1P55316 489 aaPredicted RBP7.58□□□□□ -1.2
TDP1-203ENST00000393454 TMPRSS3P57727 454 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 CNIH2Q6PI25 160 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 ABHD12BQ7Z5M8 362 aaPredicted RBP7.58□□□□□ -1.2
TDP1-203ENST00000393454 LRRTM1Q86UE6 522 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 NAA40Q86UY6 237 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 GCNT2Q8N0V5 402 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 OR1F12Q8NHA8 337 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 FGFBP3Q8TAT2 258 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 FGGYQ96C11 551 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 GMPPAQ96IJ6 420 aaPredicted RBP7.58□□□□□ -1.2
TDP1-203ENST00000393454 GFI1Q99684 422 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 OR2H1Q9GZK4 316 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 TAS2R4Q9NYW5 299 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 ABRACLQ9P1F3 81 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 CLCF1Q9UBD9 225 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 DKK4Q9UBT3 224 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 MGAQ8IWI9 3026 aa7.58□□□□□ -1.2
TDP1-203ENST00000393454 ARHGAP21Q5T5U3 1957 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 A6NIN4 97 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 IFITM5A6NNB3 132 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 RPL36A-HNRNPH2H7BZ11 118 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 M0R135 149 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 UPK1BO75841 260 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 APOC1P02654 83 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ABOP16442 354 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ADRA2CP18825 462 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ELK1P19419 428 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 CTSSP25774 331 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 APEX1P27695 318 aaKnown RBP7.57□□□□□ -1.2
TDP1-203ENST00000393454 GNALP38405 381 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 HTR5AP47898 357 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 EVX1P49640 407 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 PSMD7P51665 324 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 CXADRP78310 365 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 PSG4Q00888 419 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ECH1Q13011 328 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 IL18Q14116 193 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 SLC36A2Q495M3 483 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 PYDC2Q56P42 97 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 FAM180AQ6UWF9 173 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 CNEP1R1Q8N9A8 125 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 DTX3Q8N9I9 347 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 OR5H6Q8NGV6 325 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ZNF799Q96GE5 643 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 FAM71F1Q96KD3 344 aaPredicted RBP7.57□□□□□ -1.2
TDP1-203ENST00000393454 HDHD2Q9H0R4 259 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ZCCHC4Q9H5U6 513 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 GP6Q9HCN6 339 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 GPR84Q9NQS5 396 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 GLRX2Q9NS18 164 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ZNF275Q9NSD4 429 aaPredicted RBP7.57□□□□□ -1.2
TDP1-203ENST00000393454 EXTL2Q9UBQ6 330 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 V9GYH0 126 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 LAMA5O15230 3695 aa7.57□□□□□ -1.2
TDP1-203ENST00000393454 ARPC4-TTLL3A0A0A6YYG9 625 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 AHRRA9YTQ3 701 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 AIPO00170 330 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 SYNGR3O43761 229 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 SS18L1O75177 396 aaPredicted RBP7.56□□□□□ -1.2
TDP1-203ENST00000393454 EIF4EP06730 217 aaKnown RBP7.56□□□□□ -1.2
TDP1-203ENST00000393454 ZNF20P17024 532 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 TALDO1P37837 337 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 OR3A2P47893 321 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 TPTEP56180 551 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 CLDN12P56749 244 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 IFITM3Q01628 133 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 STK11Q15831 433 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 ZNF181Q2M3W8 571 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 RGS21Q2M5E4 152 aa7.56□□□□□ -1.2
TDP1-203ENST00000393454 RSPO1Q2MKA7 263 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms