RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 BCDIN3DQ7Z5W3 292 aaKnown RBP17.01■□□□□ 0.31
CCDC50-202ENST00000392456 TMEM200AQ86VY9 491 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 SLC25A36Q96CQ1 311 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 ARHGAP9Q9BRR9 750 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 OR10A4Q9H209 315 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 EGLN3Q9H6Z9 239 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 C9J4A7 227 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 PMP2P02689 132 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 IL12BP29460 328 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 CARD18P57730 90 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 ZNF626Q68DY1 528 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 OR6V1Q8N148 313 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 BEND2Q8NDZ0 799 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 OR2Y1Q8NGV0 311 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 MAFIPQ8WZ33 124 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 NDUFAF3Q9BU61 184 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 PADI1Q9ULC6 663 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 MRPS18CQ9Y3D5 142 aaKnown RBP17.01■□□□□ 0.31
CCDC50-202ENST00000392456 CNTRLQ7Z7A1 2325 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 A0A0B4J2E0 115 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 A0A1B0GX12 115 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 SCDO00767 359 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 FMO6PO60774 539 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 WISP1O95388 367 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 NGFRP08138 427 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 NPSP0C0P6 89 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 CLUP10909 449 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 TOMM34Q15785 309 aaPredicted RBP17■□□□□ 0.31
CCDC50-202ENST00000392456 FAM69AQ5T7M9 428 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 MBOAT2Q6ZWT7 520 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 GPR137CQ8N3F9 429 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 OR52I1Q8NGK6 324 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 UQCC1Q9NVA1 299 aa17■□□□□ 0.31
CCDC50-202ENST00000392456 NXT1Q9UKK6 140 aaKnown RBP17■□□□□ 0.31
CCDC50-202ENST00000392456 A8MXE2 369 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 CREBL2O60519 120 aaPredicted RBP16.99■□□□□ 0.31
CCDC50-202ENST00000392456 TCN2P20062 427 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 F2RL1P55085 397 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 FBXW4P57775 412 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 GMFBP60983 142 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 C12orf73Q69YU5 71 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 NR2C2APQ86WQ0 139 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 CDK20Q8IZL9 346 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 SAMD12Q8N8I0 201 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 OR8J1Q8NGP2 316 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 MALSU1Q96EH3 234 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 PHYHIPLQ96FC7 376 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 GINS4Q9BRT9 223 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 PTGES2Q9H7Z7 377 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 TMEM27Q9HBJ8 222 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 MEPEQ9NQ76 525 aaPredicted RBP16.99■□□□□ 0.31
CCDC50-202ENST00000392456 IL20RAQ9UHF4 553 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 SLC35A3Q9Y2D2 325 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 NPFFR2Q9Y5X5 522 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 LOC400499M0QZD8 3231 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 DCHS1Q96JQ0 3298 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 LOC102723996A0A087X1L8 192 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 RAB36O95755 333 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 PSMB1P20618 241 aaKnown RBP16.99■□□□□ 0.31
CCDC50-202ENST00000392456 ACKR3P25106 362 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 HOXC12P31275 282 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 MMP15P51511 669 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 OR2G6Q5TZ20 316 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 C6orf15Q6UXA7 325 aaPredicted RBP16.99■□□□□ 0.31
CCDC50-202ENST00000392456 POGLUT1Q8NBL1 392 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 TMEM208Q9BTX3 173 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 ZDHHC8Q9ULC8 765 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 LAMA5O15230 3695 aa16.99■□□□□ 0.31
CCDC50-202ENST00000392456 IGHV1-45A0A0A0MS14 117 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 C2orf72A6NCS6 295 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 SYNDIG1LA6NDD5 238 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 A6NLC8 198 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 ADAM10O14672 748 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 ARPC1BO15143 372 aaKnown RBP16.98■□□□□ 0.31
CCDC50-202ENST00000392456 KLF4O43474 513 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 RAB5AP20339 215 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 MAKP20794 623 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 DLX5P56178 289 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 OR2B8PP59922 312 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 GINS1Q14691 196 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 TMEM244Q5VVB8 128 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 SFRP4Q6FHJ7 346 aaPredicted RBP16.98■□□□□ 0.31
CCDC50-202ENST00000392456 CD300LDQ6UXZ3 194 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 ANGPTL5Q86XS5 388 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 C17orf47Q8NEP4 570 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 CT55Q8WUE5 264 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 TMEM239Q8WW34 195 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 THAP4Q8WY91 577 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 WDR13Q9H1Z4 485 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 TREM1Q9NP99 234 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 C19orf25Q9UFG5 118 aaPredicted RBP16.98■□□□□ 0.31
CCDC50-202ENST00000392456 GDF2Q9UK05 429 aaPredicted RBP16.98■□□□□ 0.31
CCDC50-202ENST00000392456 SPTBN2O15020 2390 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 A8MWP6 167 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 CBR3O75828 277 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 COX6A1P12074 109 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 CPT2P23786 658 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 CCR4P51679 360 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 H2BFSP57053 126 aa16.98■□□□□ 0.31
CCDC50-202ENST00000392456 OCLNQ16625 522 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms