RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 KDM8Q8N371 416 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 OR51A4Q8NGJ6 313 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 SPACA1Q9HBV2 294 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 PPP4R1LQ9P1A2 415 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 GPN3Q9UHW5 284 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-204ENST00000392003 VDAC3Q9Y277 283 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 TRAV18A0A075B6X5 111 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 TRBV11-1A0A0K0K1C0 115 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 A0A1B0GUH1 482 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 hCG_1807616A0A1W2PRN6 198 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 UBE2QL1A1L167 161 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 MEGF11A6BM72 1044 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 TGM6O95932 706 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 IGHMP01871 453 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 S100A9P06702 114 aaKnown RBP8.64□□□□□ -1.03
COL6A3-204ENST00000392003 SMIM6P0DI80 62 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 ZNF41P51814 821 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-204ENST00000392003 GFOD2Q3B7J2 385 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 PCGF3Q3KNV8 242 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 OLFML2AQ68BL7 652 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 C16orf47Q6ZP98 133 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-204ENST00000392003 ARRDC1Q8N5I2 433 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 OR52N5Q8NH56 324 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 MFSD8Q8NHS3 518 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 MCHR2Q969V1 340 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 FAM3DQ96BQ1 224 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 MISP3Q96FF7 219 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 ZC3H10Q96K80 434 aaKnown RBP8.64□□□□□ -1.03
COL6A3-204ENST00000392003 RBP7Q96R05 134 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 CMKLR1Q99788 373 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 SERINC1Q9NRX5 453 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 CENPMQ9NSP4 180 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 MED11Q9P086 117 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 HHLA2Q9UM44 414 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 WASF3Q9UPY6 502 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 ALPK2Q86TB3 2170 aa8.64□□□□□ -1.03
COL6A3-204ENST00000392003 KNTC1P50748 2209 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 PATE3B3GLJ2 98 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 J3QW42 95 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 SLC17A2O00624 439 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CREBL2O60519 120 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CSF1P09603 554 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 PTHLHP12272 177 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 DCTDP32321 178 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 PRSS3P35030 304 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 DUSP3P51452 185 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 DCDP81605 110 aaKnown RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ROM1Q03395 351 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 PABPC1L2AQ5JQF8 200 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 OR2T35Q8NGX2 323 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ATG5Q9H1Y0 275 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 MRPL22Q9NWU5 206 aaKnown RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 LUZP4Q9P127 313 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 MGAT4CQ9UBM8 478 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ZNF69Q9UC07 566 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 PILRBQ9UKJ0 227 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 LOC100289279A0A1B0GTE1 492 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CXorf65A6NEN9 183 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 RLN1P04808 185 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 H2BFMP0C1H6 154 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 IFNGR1P15260 489 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ZXDAP98168 799 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 POU3F1Q03052 451 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ANKRD16Q6P6B7 361 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 COX15Q7KZN9 410 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 C1orf210Q8IVY1 113 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CPEB3Q8NE35 698 aaKnown RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 OR11G2Q8NGC1 345 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 OR13C3Q8NGS6 347 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 NUBPLQ8TB37 319 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 IFI44Q8TCB0 444 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 SLC25A44Q96H78 314 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CCDC74BQ96LY2 380 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CHIAQ9BZP6 476 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ZNF436Q9C0F3 470 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 METTL7AQ9H8H3 244 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CHST11Q9NPF2 352 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 C19orf25Q9UFG5 118 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 SH3BGRL2Q9UJC5 107 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 LRP12Q9Y561 859 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 GPR179Q6PRD1 2367 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 GGT3PA6NGU5 568 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 MARCH11A6NNE9 402 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CER1O95813 267 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 HPXP02790 462 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ZNF81P51508 661 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 PSMA6P60900 246 aaKnown RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 SHBQ15464 509 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 HYAL4Q2M3T9 481 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 C2orf76Q3KRA6 126 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 CLLU1Q5K131 121 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 KLHL24Q6TFL4 600 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 TIPARPQ7Z3E1 657 aaKnown RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 WDR5BQ86VZ2 330 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 SAP25Q8TEE9 199 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ROBO4Q8WZ75 1007 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 HGDQ93099 445 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 GPR137Q96N19 417 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ATG101Q9BSB4 218 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms