RNA–Protein interactions for RNA: ENST00000390980.1

RNU6-578P-201, Transcript of RNA, U6 small nuclear 578, pseudogene, humanhuman

BASIC

Gene RNU6-578P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-578P-201ENST00000390980 PABPC4LP0CB38 370 aaKnown RBP-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 HSMCR30P0CW71 290 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 CYP2F1P24903 491 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 RND2P52198 227 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 CTAG1AP78358 180 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 CYP24A1Q07973 514 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 TGM3Q08188 693 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 PNOCQ13519 176 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 LRRC29Q8WV35 223 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 OSTF1Q92882 214 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 DCPSQ96C86 337 aaKnown RBP-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 MRPL38Q96DV4 380 aaKnown RBP-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 SLC25A44Q96H78 314 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 SMOXQ9NWM0 555 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 CTNNA3Q9UI47 895 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 KCNE3Q9Y6H6 103 aa-0.34□□□□□ -2.46
RNU6-578P-201ENST00000390980 BAZ1BQ9UIG0 1483 aaKnown RBP-0.35□□□□□ -2.46
RNU6-578P-201ENST00000390980 DENND4AQ7Z401 1863 aa-0.35□□□□□ -2.46
RNU6-578P-201ENST00000390980 LEUTXA8MZ59 168 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 TNFRSF11BO00300 401 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 RDH16O75452 317 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 SERPINB7O75635 380 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 GATBO75879 557 aaKnown RBP-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 SCO1O75880 301 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 KCNK2O95069 426 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 PTBP3O95758 552 aaKnown RBP-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 NRASP01111 189 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 HRASP01112 189 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 KRASP01116 189 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 GZMAP12544 262 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 DUSP3P51452 185 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 YBEYP58557 167 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 ECH1Q13011 328 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 DGCR6Q14129 220 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 QPRTQ15274 297 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 TATDN3Q17R31 274 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 FA2HQ7L5A8 372 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 TMEM123Q8N131 208 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 ZNF420Q8TAQ5 688 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 UBE2Q2Q8WVN8 375 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 CXCL16Q9H2A7 254 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 PPA2Q9H2U2 334 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 NIPAL2Q9H841 368 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 RAB18Q9NP72 206 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 DYRK4Q9NR20 520 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 PDP1Q9P0J1 537 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 FARSAQ9Y285 508 aaKnown RBP-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 NPTNQ9Y639 398 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 SLC22A7Q9Y694 548 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 MPDZO75970 2070 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 ATP10AO60312 1499 aa-0.35□□□□□ -2.47
RNU6-578P-201ENST00000390980 SPAG9O60271 1321 aaKnown RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 SYNE1Q8NF91 8797 aaKnown RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 CRB1P82279 1406 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 IGKV1OR2-108A0A075B7D4 117 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 ZNF816-ZNF321PA0A0X1KG74 233 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 A8MWL6 223 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 CDC40O60508 579 aaKnown RBP eCLIP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 C1orf105O95561 183 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 ERGP11308 486 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 PRKACBP22694 351 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 MAPK3P27361 379 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 MPIP34949 423 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 POLR2IP36954 125 aaKnown RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 VHLP40337 213 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 RBM34P42696 430 aaKnown RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 OR12D2P58182 307 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 ACTG2P63267 376 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 PDZK1IP1Q13113 114 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 SELPLGQ14242 412 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 LGALSLQ3ZCW2 172 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 ZNF678Q5SXM1 525 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 RBM43Q6ZSC3 357 aaKnown RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 LYPD6Q86Y78 171 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 OR8K3Q8NH51 312 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 OR10G6Q8NH81 332 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 OR1L1Q8NH94 360 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 CTNNBL1Q8WYA6 563 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 YIPF5Q969M3 257 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 SLC38A2Q96QD8 506 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 THAP9Q9H5L6 903 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 TMEM27Q9HBJ8 222 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 INIPQ9NRY2 104 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 ARGLU1Q9NWB6 273 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 MRPL16Q9NX20 251 aaKnown RBP-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 LRRC42Q9Y546 428 aa-0.36□□□□□ -2.47
RNU6-578P-201ENST00000390980 SMIM26A0A096LP01 95 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 RGSL1A5PLK6 1076 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 IZUMO1RA6ND01 250 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 H3BRN7 92 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 PRRG1O14668 218 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 SLC31A1O15431 190 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 MT-ND4P03905 459 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 EIF4EP06730 217 aaKnown RBP-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 GZMBP10144 247 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 ZNF43P17038 809 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 HLA-DPA1P20036 260 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 TALDO1P37837 337 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 PRPHP41219 470 aa-0.37□□□□□ -2.47
RNU6-578P-201ENST00000390980 PRR3P79522 188 aaKnown RBP-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms