RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SLC17A5Q9NRA2 495 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 PAQR5Q9NXK6 330 aaPredicted RBP22.21■■□□□ 1.15
SHOX2-201ENST00000389589 LOC100289279A0A1B0GTE1 492 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 CENPXA8MT69 81 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 ZNF708P17019 499 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 BCL2A1Q16548 175 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 RIPPLY2Q5TAB7 128 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 VASH2Q86V25 355 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 OR51D1Q8NGF3 324 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 OR6M1Q8NGM8 313 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 FGGYQ96C11 551 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 MEIOCA2RUB1 952 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 CD3GP09693 182 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 CEACAM1P13688 526 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 CDK2P24941 298 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 HTR2CP28335 458 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 NTF4P34130 210 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 POU3F4P49335 361 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 CARTPTQ16568 116 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 KRT74Q7RTS7 529 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 LRRC18Q8N456 261 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 ZFP62Q8NB50 900 aaPredicted RBP22.2■■□□□ 1.14
SHOX2-201ENST00000389589 OR8B12Q8NGG6 310 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 OR51E1Q8TCB6 317 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 C7orf50Q9BRJ6 194 aaKnown RBP22.2■■□□□ 1.14
SHOX2-201ENST00000389589 SLC6A15Q9H2J7 730 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 PLEKHA1Q9HB21 404 aa22.2■■□□□ 1.14
SHOX2-201ENST00000389589 IGKV3D-15A0A087WSY6 115 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 A0A1B0GTI1 187 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 GABARAPH6UMI1 98 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 APOC1P02654 83 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 PTH2RP49190 550 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 PPIAP62937 165 aaKnown RBP22.19■■□□□ 1.14
SHOX2-201ENST00000389589 ARG2P78540 354 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 PRSS45Q7RTY3 260 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 SCMH1Q96GD3 660 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 CRLF2Q9HC73 371 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 NLKQ9UBE8 527 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 FREM2Q5SZK8 3169 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 LMX1BO60663 402 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 SYNGR4O95473 234 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 SLC6A1P30531 599 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 DDOSTP39656 456 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 CAPZA1P52907 286 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 C2orf76Q3KRA6 126 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 ELFN2Q5R3F8 820 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 RSBN1Q5VWQ0 802 aaPredicted RBP22.19■■□□□ 1.14
SHOX2-201ENST00000389589 ANKRD16Q6P6B7 361 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 OR5D14Q8NGL3 314 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 SLC25A28Q96A46 364 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 ACKR4Q9NPB9 350 aa22.19■■□□□ 1.14
SHOX2-201ENST00000389589 LOC390937A0A1W2PQ73 354 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 CST2P09228 141 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 CCL1P22362 96 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 SPOCK1Q08629 439 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 CD300CQ08708 224 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 TMEM178AQ8NBL3 297 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 OR51A2Q8NGJ7 313 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 OR1J2Q8NGS2 313 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 ABHD3Q8WU67 409 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 ZNF837Q96EG3 531 aaPredicted RBP22.18■■□□□ 1.14
SHOX2-201ENST00000389589 ZNF552Q9H707 407 aaPredicted RBP22.18■■□□□ 1.14
SHOX2-201ENST00000389589 TMEM38BQ9NVV0 291 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 SLC5A6Q9Y289 635 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 XRCC3O43542 346 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 BDKRB2P30411 391 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 GNALP38405 381 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 GALK2Q01415 458 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 SRYQ05066 204 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 CCDC92Q53HC0 331 aaPredicted RBP22.18■■□□□ 1.14
SHOX2-201ENST00000389589 RNASE12Q5GAN4 147 aaKnown RBP22.18■■□□□ 1.14
SHOX2-201ENST00000389589 C1orf100Q5SVJ3 147 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 GLYATL3Q5SZD4 288 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 TMPRSS7Q7RTY8 843 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 ABHD12BQ7Z5M8 362 aaPredicted RBP22.18■■□□□ 1.14
SHOX2-201ENST00000389589 FCAMRQ8WWV6 532 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 MARVELD1Q9BSK0 173 aa22.18■■□□□ 1.14
SHOX2-201ENST00000389589 MCTS1Q9ULC4 181 aaKnown RBP22.18■■□□□ 1.14
SHOX2-201ENST00000389589 NKX2-8O15522 239 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 ACTL6AO96019 429 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 TPTEP56180 551 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 TAS2R20P59543 309 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 DYRK1AQ13627 763 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 SLC10A1Q14973 349 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 ZNF766Q5HY98 468 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 FAM57BQ71RH2 274 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 DOK3Q7L591 496 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 FAM109AQ8N4B1 249 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 DIABLOQ9NR28 239 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 EMC3Q9P0I2 261 aa22.17■■□□□ 1.14
SHOX2-201ENST00000389589 DCDC2BA2VCK2 349 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 ACOT7O00154 380 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 KRT33AO76009 404 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 SLC2A1P11166 492 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 ZNF20P17024 532 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 SRP9P49458 86 aaKnown RBP22.16■■□□□ 1.14
SHOX2-201ENST00000389589 ZNF813Q6ZN06 617 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 COMMD2Q86X83 199 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 SIAH3Q8IW03 269 aa22.16■■□□□ 1.14
SHOX2-201ENST00000389589 JAGN1Q8N5M9 183 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms